Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0466 ATGGAAGGCATGTCAGCCATTTGGAAGGACTACTGGAGCAGAAGAAGCTACCGTAGATTAAATGGTTCGGGCGGGCGAAGGAGGAACACTACTGGGAGGAGGAGGCGGATGTGGAGGATCAAGGTGGCCCCCAAGATTCGAATTACCAAGATGCCTTCGCCTAAAAAGTTGCTGCTGTGGCTCAGGGACTCCTACACGAGAATGATGATGGGATTGGCCAACTCCCGGTTGACCAGCAGCATGAGTTCTGCTCCCTATGGGAGTGGGTTCGGCAGGGCCCCAGTCAAGGAGTACGACCACAAGATGATCGTCCAGATCTACAACTCGTTGATGATGGGCCAGGGAAAGTTGGTGCCGCCGGACCCTATCCATCCTGCAAAAACAGTTGCTCCAGCAAAGCTCTCTCCCTCCAAAAAAAAAACTTGCTTTCTTTTCCGTCCATCCATTTTCTTTTTATGTATTTGCAAAAGAGGGGAACATTATGGCAGACCCAGAGGAGAGCTAGAAACTAGAAAGCGCGACCTTTTCAATTCCTCTTCTCTCTCCTCTGCTTTAGCACTCCTCGAATTCGCTTCTCTCCCACGGTATCCTTACTCTGATTCATACACATTCCCAGACTCGGACTCAGAGAAAGAGACCGATTCCAACTACTTTCCCTTCGATATATCCCCCTCTTTCTCCACAACTCTGGCGGACATAAAAGGAACCCTACCGTTCCTTTCGTCGATTCTTGCAGATCGTCCCGATTTCAAGTCCAAGAACAAGAACTGGAGGAGGGCGTTTTACGGCCTCAAAATGTTGTGGATTTTGAGGTTTTCGGGCTTTTTCTCCGCCGCAATGGTGATGATAATTCTCTCTCCATCCTTGCAATCGTTTCCTCCGGCAGAAGCTATTCGATCCTCTCACCTCGATGCCTATCTCCGTCTACCGCTCCGGATGCCCCCGCCCCATCGTGAGAATCGATTTTTGTTCCGGAAAGCCTCCGTATTCCGCAATGCCGATGAATGTGGTTCGAATCAAAGCGGGATTTCCGGGAAAATCAGTGTGTGCGATCCTTCGTTGGTACACGTAGCGATAACTCTTGACGTTGAATACTTGCGGGGTTCAATTGCTGCAGTGCACTCCATCCTGCAGCATTCCCCGTGCCCGGAGAGCATCTTCTTTCACTTCCTTGTGTCGGACACGAATCTGGAGTCATTAGTTCAGTCGACGTTCCCCAGGCTGAAGTTCAGGGTTTATTACTTCGACCCTAATATTGTAAAGAACCTGATCTCGACCTCTGTGAGGCAAGCCCTTGAACAGCCCCTGAATTATGCCAGGAATTACTTGGCGGATCTTCTGGTGAGCTGCGTACAGAGGGTGATTTACTTGGACTCTGATCTAGTTGTGGTGGATGATATTTCCAAACTGTGGGGTACGAACTTGGGTTCTAGAACCATCGGGGCTCCGGAATACTGTCACGCTAACTTCACCAAGTATTTCACGGTAGGGTTTTGGTCGGACCAGAGGTTGTCCGTCACTTTTGCGCGGCGGAAACCATGCTACTTCAACACTGGAGTGATGGTTATAGATCTAGTCAAATGGAGGAAGGCTGGGTACACGAAGAGAATCGAGAGGTGGATGGAAATTCAGAAGAGCGATAGGATCTACGAGCTGGGTTCTCTGCCGCCGTACTTGCTGGTATTTGCGGGACATGTGGCACCAATTGAGCACCGATGGAACCAACACGGCTTGGGTGGGGATAACGTCAGGGGCAGCTGTCGAGACTTGCACCCTGGCCCAGTTAGCCTGCTGCATTGGTCTGGTAGCGGCAAGCCGTGGCTCAGGCTTGACTCCAACGGGCCCTGCCCACTCGACGCACTATGGGCGCCCTATGATCTGTACGGGCACTCATAG 1896 0.5116 MEGMSAIWKDYWSRRSYRRLNGSGGRRRNTTGRRRRMWRIKVAPKIRITKMPSPKKLLLWLRDSYTRMMMGLANSRLTSSMSSAPYGSGFGRAPVKEYDHKMIVQIYNSLMMGQGKLVPPDPIHPAKTVAPAKLSPSKKKTCFLFRPSIFFLCICKRGEHYGRPRGELETRKRDLFNSSSLSSALALLEFASLPRYPYSDSYTFPDSDSEKETDSNYFPFDISPSFSTTLADIKGTLPFLSSILADRPDFKSKNKNWRRAFYGLKMLWILRFSGFFSAAMVMIILSPSLQSFPPAEAIRSSHLDAYLRLPLRMPPPHRENRFLFRKASVFRNADECGSNQSGISGKISVCDPSLVHVAITLDVEYLRGSIAAVHSILQHSPCPESIFFHFLVSDTNLESLVQSTFPRLKFRVYYFDPNIVKNLISTSVRQALEQPLNYARNYLADLLVSCVQRVIYLDSDLVVVDDISKLWGTNLGSRTIGAPEYCHANFTKYFTVGFWSDQRLSVTFARRKPCYFNTGVMVIDLVKWRKAGYTKRIERWMEIQKSDRIYELGSLPPYLLVFAGHVAPIEHRWNQHGLGGDNVRGSCRDLHPGPVSLLHWSGSGKPWLRLDSNGPCPLDALWAPYDLYGHS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0466 631 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 282 630 - -
Glsi11g0466 631 Pfam Glycosyl transferase family 8 356 609 IPR002495 GO:0016757
Glsi11g0466 631 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 356 614 IPR029044 -
Glsi11g0466 631 FunFam Hexosyltransferase 356 616 - -
Glsi11g0466 631 SUPERFAMILY Nucleotide-diphospho-sugar transferases 355 629 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0466 Glsi-ChrGlsi11 3065792 3070030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0466 266 630 Glycosyltransferase AT3G62660 80.274 0.0 602
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3391 02 81424306 81425409 Glsi11g0466 11 3065792 3070030 CCT
Glsi11g0466 11 3065792 3070030 Glsi11g0466 11 3065792 3070030 ECH