Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3391 ATGCTGTGGATTATGAGATTTTCGGGCTTTTTTTCCGCCGCAATGGCCATGATTATTCTCTCTCCATCTCTGCAATCATTTCCTCCGGCGGAAGCCATCCGATCCTCCCACCTCGATGGCTATCTTCGTCTACCTGTTCAGATGCCCCTCACCGATAGTGAGAACACATTTTCGTTCCGGAAAGCCTCTGCATTCCGCAATGCCGATGAATGTGGTTCGAATCGAAGGGGGTTTTCGGGGAAAATGAGTGTTTGCGACCCTTCTTTGGTACACGTAGCGATAACTCTTGATGTTGAATACCTGCGCGGTTCGATTGCCGCAGTGCACTCCATACTGCAGCATTCTTTGTGCCCGGAAAGTATCTTCTTCCACTTCCTCGTATCGGATACAAGTCTGGAGTCCCTAGTTCAATCGACTTTCCCCCAGTTGAAGTTCAAGGTGTATTACTTCGATCCAAAGATTGTAAGAAACCTGATCTCAACCTCCGTGAGGCAAGCGCTTGAACAGCCCCTGAATTATGCCAGGAATTACTTGGCGGATCTTCTGGAGACCTGCGTGCGCAGAGTGATTTACCTGGATTCTGATCTAGTTGTGGTCGATGATATATCCAAGCTGTGGAGTACGAGCTTGGGTTCTAGAACCATCGGGGCTCCGGAATACTGTCATGCCAACTTCACCAAGTATTTCACGGCGAGGTTTTGGTCGGACAAGCGGTTCTCCGACACATTTGCGCGGCGGAAACCGTGCTATTTCAACACTGGAGTTATGGTGATAGATCTAGTTAAGTGGAGGAAAGCTCGGTACACGAAGCATATTGAGAGGTGGATGGAAATCCAGAAGAGCGATCGGATCTACGAGCTGGGTTCACTGCCGCCGTTCCTACTGGTTTTCGCTGGACACGTGGCACCCATTGAGCACCGCTGGAACCAACACGGCCTGGGCGGTGATAACGTCAGGGGCAGCTGTCGAGACTTGCACGCAGGCCCAGTTAGCCTTCTGCATTGGTCCGGTAGCGGCAAGCCCTGGCTCAGGCTGGACTCCAAAAGGCCCTGCCCCCTCGACGCGTTATGGGCGCCATACGATTTGTACGGACACACTCCCTGA 1104 0.519 MLWIMRFSGFFSAAMAMIILSPSLQSFPPAEAIRSSHLDGYLRLPVQMPLTDSENTFSFRKASAFRNADECGSNRRGFSGKMSVCDPSLVHVAITLDVEYLRGSIAAVHSILQHSLCPESIFFHFLVSDTSLESLVQSTFPQLKFKVYYFDPKIVRNLISTSVRQALEQPLNYARNYLADLLETCVRRVIYLDSDLVVVDDISKLWSTSLGSRTIGAPEYCHANFTKYFTARFWSDKRFSDTFARRKPCYFNTGVMVIDLVKWRKARYTKHIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVRGSCRDLHAGPVSLLHWSGSGKPWLRLDSKRPCPLDALWAPYDLYGHTP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3391 367 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 21 365 - -
Glsi02g3391 367 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 365 IPR029044 -
Glsi02g3391 367 FunFam Hexosyltransferase 91 351 - -
Glsi02g3391 367 Pfam Glycosyl transferase family 8 91 344 IPR002495 GO:0016757
Glsi02g3391 367 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 351 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3391 Glsi-ChrGlsi02 81424306 81425409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3391 1 365 Glycosyltransferase AT3G62660 80.000 0.0 599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3391 02 81424306 81425409 Glsi11g0466 11 3065792 3070030 CCT
Glsi02g3391 02 81424306 81425409 Glsi02g3391 02 81424306 81425409 ECH