Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0457 ATGGATACTCTCTGTTTTAAAAGTGGTATACCTGGGATACCTCCGTCGATCTCTGTTAGTGGGTCATTGGACGCACGCACAAATCCATCTCAGGTGAGCGCAGTGGGGCGGCCCTCCACCGAGAAATCTTCACAGAAGTCGATCTTTTCCAAATTCTTGTTCAAGTATCCTTTGAAATCTCTATGGCCTGGCGGAAGCGGAAATAGCAGGTACAATGGGTTGGCCATCGACGACGCCGTCTCCGTGGAAGGCGAGGAAGGGAAACCTGTTCAAGAGGACAGCCAGATTGAAACCATGGGACCTGAGGGTCAGAGTGGGAACTGGGTCTTAAAGATTTTGCAGGTCAAGTCTATTTGGAGGGGGGAACAGGGGATCGGTGCTAATAGCGGTGTTGATCAAGATGATGGAATTGAAGGCGAGGGTGTCGCAAATGATCAAAGAAACGGGTCTGAGTCTGACAATGATGACGAGGAGAGCCGGGAGGAGGCATGTGATGCTTGTAAGATTGATGACGATGAGGATGAAGAGGTTCAATTTGATAGGGACTCATATTCAAGAATGCTTCGGAGGGTGTCGTTAGCTGATGCTAGATTGTATGCGCAGATGTCCTACTTAGGGAACTTGGCATACTCTATACCCAAAATCAAGACAGGGAACCTCTTAAAATATTACGCACTGCGTTTTGTGACTTCATCAATAGAGAAGAAGGAATTGGCAACAACAGCTGAAAACAATCAGGCATTAGCTGAAACTCAGGAAGTAGAAACTAATGAGATTGAGATTGACAAAGGAGAAGTAAAGGAGCAGAAGAACATTGGATACAAGATAAGTGCATCTGCTGCTTATCAGATTGCTGCCTCTGCTGCCTCTTACCTCCATGCTCAGACGAGGAGCATAATTCCATTCAAATCCTCAAAAGACGGGTTAGGTGAAGGTTCACTTGAAGGAGGCAGTGAAAGCGTTGATGGTGCTAACATGATAGATACAGAGGTTGCTTCTTTGATGGCGACTACCAATTCAGTGACAGCTGTGGTTGCTGCAAAGGAGGAAGTGAAGCAGGCTGTTGCAGATGATCTGAACTCAACACGTTCATCCCCCTGTGAATGGTACATATGTGATGATGATCAGAGTGGTACTAGATTTTTTGTCATTCAGGGTTCTGAGTCTCTAGCATCCTGGCAAGCAAACCTACTTTTTGAGCCTATTCAATTTGAGGGGCTGGATATCCTTGTCCACAGAGGTATATATGAGGCTGCTAAAGGGATCTATCAACAGATGTTGCCAGAAGTCCACGCTCACCAAAAATCTCAAGGTTCTCGCGCGACCTTCCGTTTCACAGGGCATTCTCTTGGGGGAAGCTTGGCATTACTTGTAAATCTCATGCTGTTGATAAGACAGGAAGTGCCAATCTCGTCTTTGCTTCCTGTGATAACATTTGGTGCCCCTTGCATCATGTGTGGAGGTGACAGCCTCCTAGACAAGCTAGGATTGCCCCGGAGTCATGTTCAGGCAATTACAATGCACAGAGACATAGTACCACGAGCTTTTTCTTGCAATTACCCTAATCATGTCGCAGAGCTACTAAAAGCGCTTAGCAGAAATTTCCGTAATCATCCTTGTCTTAACAAGCAGAAGCTATTATATACACCTATGGGGGAACTGCTAATTCTACAGCCAGACGAGAAGTTTTCCCCAAGCCATCACCTCCTTCCCTCGGGCAGTGGCCTTTATCTTTTGAGTGGTCATTTGCCAGAATCCAATGAAATAAACAAGCAACTCCGAGCTGCTCAGTTGGCATTTCTGAACTCACCACATCCACTTGAGATCTTAAGTGACCGATCTGCTTATGGCTCCGGTGGAATCATACAAAGAGATCATGACATGAGATCCTACTTAAAATCTGTGAGAACTGTGATTCGCCAAGAACTCATGTGCATCCGCAGGGCAAAGAGAGAGCATCGGCGCAAGCTGTGGTGGCCTCTTGATGTCGGCATTGTTCTGGGGAGCTCCATGGGTCAAGAGTCATTGAAAAGGTTGAGCAGGCTTGTTGCATCCCGCCATATGCATTTGTTTGTGGTGCTCTTGTTCCCTGCACGGTTTTTACTCTTGTGGGGATATAGCACCATCAGTTTCCGTTGA 2139 0.4652 MDTLCFKSGIPGIPPSISVSGSLDARTNPSQVSAVGRPSTEKSSQKSIFSKFLFKYPLKSLWPGGSGNSRYNGLAIDDAVSVEGEEGKPVQEDSQIETMGPEGQSGNWVLKILQVKSIWRGEQGIGANSGVDQDDGIEGEGVANDQRNGSESDNDDEESREEACDACKIDDDEDEEVQFDRDSYSRMLRRVSLADARLYAQMSYLGNLAYSIPKIKTGNLLKYYALRFVTSSIEKKELATTAENNQALAETQEVETNEIEIDKGEVKEQKNIGYKISASAAYQIAASAASYLHAQTRSIIPFKSSKDGLGEGSLEGGSESVDGANMIDTEVASLMATTNSVTAVVAAKEEVKQAVADDLNSTRSSPCEWYICDDDQSGTRFFVIQGSESLASWQANLLFEPIQFEGLDILVHRGIYEAAKGIYQQMLPEVHAHQKSQGSRATFRFTGHSLGGSLALLVNLMLLIRQEVPISSLLPVITFGAPCIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKALSRNFRNHPCLNKQKLLYTPMGELLILQPDEKFSPSHHLLPSGSGLYLLSGHLPESNEINKQLRAAQLAFLNSPHPLEILSDRSAYGSGGIIQRDHDMRSYLKSVRTVIRQELMCIRRAKREHRRKLWWPLDVGIVLGSSMGQESLKRLSRLVASRHMHLFVVLLFPARFLLLWGYSTISFR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0457 712 MobiDBLite consensus disorder prediction 125 163 - -
Glsi11g0457 712 Gene3D alpha/beta hydrolase 322 551 IPR029058 -
Glsi11g0457 712 SUPERFAMILY alpha/beta-Hydrolases 365 551 IPR029058 -
Glsi11g0457 712 MobiDBLite consensus disorder prediction 83 103 - -
Glsi11g0457 712 CDD Lipase_3 363 521 - -
Glsi11g0457 712 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 27 701 IPR043367 GO:0008970
Glsi11g0457 712 MobiDBLite consensus disorder prediction 20 40 - -
Glsi11g0457 712 Pfam Lipase (class 3) 382 519 IPR002921 GO:0006629
Glsi11g0457 712 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0457 Glsi-ChrGlsi11 2995655 2999015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0457 1 712 Acyl Lipid Metabolism Gene Families AT1G02660 55.720 0.0 725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3411 02 81521539 81525280 Glsi11g0457 11 2995655 2999015 CCT
Glsi11g0457 11 2995655 2999015 Glsi11g0457 11 2995655 2999015 ECH