Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3411 ATGAAGTCCGTGTTTAATTCCGATACAATTCTTGGCCTTGTTCGGCATGGATCAATTGAACGAGCAACCAGACGACCCAAAATCTGGCCAACGTTGTGGGAACCTGACGCCATTGGGACTCTGGTGATTCCTGATAGCGAGATTTTTAGACAAGGCAAACAAGAGGAGGCTTCAAGAATGGATACTTTGTGTTTAAAGGGTGGTATTACTGGGATAGCTCCGTCGATTACTATAAGTGGGTCTTTGGATGCACGTTCAAATCTATCTCAACTAAGCGCGGTGGGCCGGTCCACAACGGAGCGATCGTCCCGGAAGTCTGTCTTTTCTAGATTCTCGTTTAAATACCCTCTAAAATCTCTGTGGCGAGGACAAAGTGAGAATAGCAGGTACAATGAGCTGGCCATTGACGACCCCGTGTTGGTGGATAACGGGGAAGGGAAAGCTGTTCAAGAGGGCAACGAAAGTAAGGCTATGGGTCCAGAGAGTCAAAATGAGAATTGGGTCTTTAAGATTTTGCATGTGAAGTCTATCTGGACGGGGAAACGCGGGAAGGAAAAAGGCAATGGCGGTGTTGTTGAAGATGTGGGAATTGAGGGGGAGGGCGCGGTTAATGATCAAAGAAATGGGTGTAGTGGGGAGGAGGAATGTGATGTTTGTAGGGTTGATGTCGATGATGAAGCAGATATTCAATTCGACAGAGATTCGTTTTCAAGGATGCTTCGGAGGGTGTCGTTAGCCGAAGCTAGATTGTATGAGCAGATGTCATACTTGGGGAAGTTGGCATACTCTATACCCAAAATCAAGCCAGGGAACCTCTTAAAAAATTACGGACTGCGTTTTGTAACTTCATCAATGGAGAAGAAAGAGTTAGGAAAAACAGCTGGAAAAATTGAGGCATTGACTGAAACTAAGGAAGTAGAAACTAATGAGAAGGAGCAAGAACAAAAAAATGAGGAGAACAGTAAATACAGGATAAGTGCATCCGCAGCTTACCAGATTGCTGCCTCGGCTGCTTCTTATCTCCATGCTCAGACGAGCAGCATACTTCCATTCAAATTCTCAAAAGCTGATGTTCGTGGTGGTCCTCTTGAAGGAAGCAGTGACAGTTTTCAGGGTGATAACATGTTAAACACGAAGGCGGCATCTTTGATGGCAACTACTGATTCAGTGACAGCGGTTGTTGCTGCGAAGGAAGAAGTGAAGCAGGCCGTCGCAGATGATCTCAACTCAATCTGTTCATCTCCTTGTGGATGGTTCATATGTGATGATGACCAGAGTGGCACTAGATTTTTTGTTATTCAGGGTTCTGAGTCACTGGCATCCTGGCAAGCAAACCTTATGTTTGAACCAATTGAGTTTGAGGGGTTTGATGTCCTTGTGCATAGAGGTATATATGAGGCTGCTAAAGGGATTTATCAACAGACGTTACCAGAAGTCCATGCTCACCTAAAATCTCGAGGTTCTTGTGCGACATTCCGTTTCACTGGGCATTCTCTAGGGGGAAGCTTGGCATTACTAGTAAATCTCATGCTGTTGATACGGCAGGAAGTGCCAATCTCCTCTCTACTTCCTGTAATAATATTTGGTGCTCCATCCATCATGTGTGGAGGTAATAGTCTGTTAGACAAGCTTGGATTGCCGCTGAGTCATGTTCAGGCAATTACAATGCACAGAGACATAGTACCGCGAGCCTTTTCTTGTAATTACCCTAGTCATGTTGCAGAGCTACTGAAGGCCGTTAATGGAAACTTTCGTAATCATTCTTGTCTTAATAACCAGAAGCTATTATATGCACCGATGGGTGAATTTTTGATCCTACAGCCAGATGATAAATTTTCCCCAAACCATCACCTTCTTCCCTCAGGCAGTGGTCTCTATCTATTGAGTGGTCCTTTGTCAGAGTCCAAGAAGACAGAGAGGCAGCTCCAAGCTGCTCAGTTGGTCTTCTTGAACTCACCACATCCCCTTGAGATATTAAGTGATCGTTCTGCTTACGGCTCTGAAGGAACCATACAAAGAGATCATGACATGAATTCCTACCTGATATCTTTGAGAACTGTGATTCGACAAGAACTAAACCGCGTTCGTAAGGCAAGGAGAGAGCACCGGCGCAAGCTGTGGTGGCCTCTAATGGCTCCACGTGCTCGAATTGATACCAGCATTGCCGTCGGGAGGTCCATGGTTTCATTGAATGTGGGACAGGACACTTCCACCTTATATGGCATCTTACCGACAGGGAAAGAGTACTGGAGAAAGTTGAGTAGGTTGGTTACATCCCAACATAATCATTTGTTAGTAGTGCTTTTCTTCCCTGCACGATTGCTACTATTGGGGGCATATAGCATGATTAGGATCCGATGA 2361 0.4519 MKSVFNSDTILGLVRHGSIERATRRPKIWPTLWEPDAIGTLVIPDSEIFRQGKQEEASRMDTLCLKGGITGIAPSITISGSLDARSNLSQLSAVGRSTTERSSRKSVFSRFSFKYPLKSLWRGQSENSRYNELAIDDPVLVDNGEGKAVQEGNESKAMGPESQNENWVFKILHVKSIWTGKRGKEKGNGGVVEDVGIEGEGAVNDQRNGCSGEEECDVCRVDVDDEADIQFDRDSFSRMLRRVSLAEARLYEQMSYLGKLAYSIPKIKPGNLLKNYGLRFVTSSMEKKELGKTAGKIEALTETKEVETNEKEQEQKNEENSKYRISASAAYQIAASAASYLHAQTSSILPFKFSKADVRGGPLEGSSDSFQGDNMLNTKAASLMATTDSVTAVVAAKEEVKQAVADDLNSICSSPCGWFICDDDQSGTRFFVIQGSESLASWQANLMFEPIEFEGFDVLVHRGIYEAAKGIYQQTLPEVHAHLKSRGSCATFRFTGHSLGGSLALLVNLMLLIRQEVPISSLLPVIIFGAPSIMCGGNSLLDKLGLPLSHVQAITMHRDIVPRAFSCNYPSHVAELLKAVNGNFRNHSCLNNQKLLYAPMGEFLILQPDDKFSPNHHLLPSGSGLYLLSGPLSESKKTERQLQAAQLVFLNSPHPLEILSDRSAYGSEGTIQRDHDMNSYLISLRTVIRQELNRVRKARREHRRKLWWPLMAPRARIDTSIAVGRSMVSLNVGQDTSTLYGILPTGKEYWRKLSRLVTSQHNHLLVVLFFPARLLLLGAYSMIRIR 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3411 786 CDD Lipase_3 414 572 - -
Glsi02g3411 786 Gene3D alpha/beta hydrolase 375 599 IPR029058 -
Glsi02g3411 786 Coils Coil 297 317 - -
Glsi02g3411 786 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 89 775 IPR043367 GO:0008970
Glsi02g3411 786 Pfam Lipase (class 3) 431 568 IPR002921 GO:0006629
Glsi02g3411 786 SUPERFAMILY alpha/beta-Hydrolases 415 597 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3411 Glsi-ChrGlsi02 81521539 81525280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3411 60 786 Acyl Lipid Metabolism Gene Families AT1G02660 55.526 0.0 716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3411 02 81521539 81525280 Glsi11g0457 11 2995655 2999015 CCT
Glsi02g3411 02 81521539 81525280 Glsi02g3411 02 81521539 81525280 ECH