Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0454 ATGCTATCAAAGCATACGCTATCCTCTCGCTGGTCCGGAAGAACAAAGAAACAAAAACAAAAGCATCCAGGCTTATCTGGATATGGGTGGGACCCAAAATCCAGGAATGCCACGTGGAGACAGGTTAGCTTCATTAGTGGTGACATGGCAATGGGAATGGGAATTGTGGGGGACAAAGGAAAGGGAATTATGCTACAACACCATCAAACAACCATGGCCGTCACTACTCCCTCTCTAAATACTACAGAAAAGAAGCACTGGTGGCTTACCAACCGCAAGATTGTTGAGAAATACATTAAAGACGCTCGAAGCCTCTTTGAGACGCAAGAACAGAGCGAGATCGCCTCGGCTCTCGACCTTCTAGACGCGGCACTAGCCATCTCTCCACGCCTAGACCAAGCCCTTGAGCTAAAAGCCAGGTGTCTACTCCATATCCGGCGCTTCAAGGACGTCGCCGATATGCTTCAGGACTACATTCCAAGCCTGAAAATGGCAATGGAAGACTCAGCCTCCTATTCTTCCGATAGCTCGTCCCAGCAGCATTCAAGGGAGGGAGTCAAGCTCCTCTCATCCTCTGACTCGCAATCGCCGGGTCGGGATCAGAGTTTCAAGTGCTTCTCTGTCTCAGACTTGAAGAAGAAAGTCATGGCAGGACTCTGCAAAAATTGCGAGAAGGAAGGGCAATGGAGGTACCTGGTTTTGGGTCAAGCATGCTGCCGTCTAGGTCTAATGGAGGATGCAATGGTTCTTCTCCAAACGGGTAAACGCCTTGCCAGCGCCGCGTTCCGCCGCGAAAGCGTGTGCTGGTCTGATGATAGCTTTTCTTTAACGAACATCCCATTATCCGGAGACACCACTCCACCTCGAACACCTCTCACCGAGTCCGAGAGTGTTACCCAACTTCTCAGCCACATTAAGCTCCTTCTCCGCCGACGCACTGCGGCACTTGCGGCCCTTGACGCTGGTCTGTACACTGAGGCTATCCGCCTTTTGTCCAAAATCGTCGACGGTCGCCGTGGCGCCCCACAAGGCTTTCTCGCCGAATGCTATATGCATAGAGCCTCTGCCTACCGTTCTGCCGGTCGAATTGCAGAGGCCATTGCCGATTGTAATCGCACACTGGCTCTGAACCCATCTTGCATTCAAGCTCTTGACACCAGAGCTTCACTTCTGGAAACCATTCGATGCTTGCCAGATTGTTTACACGATCTTGAACACTTGAAACTATTGTACAATTCAATCTTGCGAGATCGCAAGCTTCCAGGTCCTGCTTGGAAGCGTCACAATGTGAGATACAGAGAGATTCCCGGGAAACTCTGCGCCCTTACAACCAAAATTCAAGAATTGAAGAAGAGGGTCGCTTCCGGGGAGACTGGTAATGTGGATTACTATGCTTTAATTGGATTGCGACGTGGATGTTCTCGATCAGAGTTGGAGAGAGCTCATCTATTGCTGTGTTTGCGGCACAAGCCTGATAAAGCTACCAATTTTATTGACCGCATCGAGCTTGCGGACGAACGTGATCTTGAATCGGTTAAGGACAGAGCAAAAATGTCAGCTTTGCTACTGTACAGATTGCTTCAGAAGGGTTACTCAAGTGTAATGGGGACGATCATGGATGAAGAAGCTGCTGAGAAGCAGAGGAAGAAGGCAGCAGCCGCTTTACAGGTTGCACAAGCAGCAATTCAGGTACAGCAATCAACTGAAGTCAAATTGGAATATGATCTGAATAAATCGGAGAAATTGGGCAGTAATCGGAGTAAGAGTTCAGTGGAAAACAAATCTACAATATGTTCGTCGATTGCGAATCCATCGGTTTTGCAGGGTGTATTTTGCCGTGATCTTGCTGTAGTTGGGAGCTTGCTTTCACAAGTGGGATTCAACCGTCCTATTCCGTTGAAGTATGAGGCATTGAGCTGCTAA 1923 0.4904 MLSKHTLSSRWSGRTKKQKQKHPGLSGYGWDPKSRNATWRQVSFISGDMAMGMGIVGDKGKGIMLQHHQTTMAVTTPSLNTTEKKHWWLTNRKIVEKYIKDARSLFETQEQSEIASALDLLDAALAISPRLDQALELKARCLLHIRRFKDVADMLQDYIPSLKMAMEDSASYSSDSSSQQHSREGVKLLSSSDSQSPGRDQSFKCFSVSDLKKKVMAGLCKNCEKEGQWRYLVLGQACCRLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLTNIPLSGDTTPPRTPLTESESVTQLLSHIKLLLRRRTAALAALDAGLYTEAIRLLSKIVDGRRGAPQGFLAECYMHRASAYRSAGRIAEAIADCNRTLALNPSCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKKRVASGETGNVDYYALIGLRRGCSRSELERAHLLLCLRHKPDKATNFIDRIELADERDLESVKDRAKMSALLLYRLLQKGYSSVMGTIMDEEAAEKQRKKAAAALQVAQAAIQVQQSTEVKLEYDLNKSEKLGSNRSKSSVENKSTICSSIANPSVLQGVFCRDLAVVGSLLSQVGFNRPIPLKYEALSC 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0454 640 SUPERFAMILY Chaperone J-domain 458 496 IPR036869 -
Glsi11g0454 640 SUPERFAMILY TPR-like 313 405 IPR011990 GO:0005515
Glsi11g0454 640 SMART tpr_5 347 380 IPR019734 GO:0005515
Glsi11g0454 640 CDD DnaJ 462 496 IPR001623 -
Glsi11g0454 640 MobiDBLite consensus disorder prediction 170 200 - -
Glsi11g0454 640 ProSiteProfiles TPR repeat profile. 347 380 IPR019734 GO:0005515
Glsi11g0454 640 PANTHER OS01G0273500 PROTEIN 75 640 - -
Glsi11g0454 640 Gene3D DnaJ domain 447 603 IPR036869 -
Glsi11g0454 640 MobiDBLite consensus disorder prediction 1 32 - -
Glsi11g0454 640 Gene3D Tetratricopeptide repeat domain 281 420 IPR011990 GO:0005515
Glsi11g0454 640 Coils Coil 541 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0454 Glsi-ChrGlsi11 2972216 2976327 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3415 02 81545488 81547833 Glsi11g0454 11 2972216 2976327 CCT
Glsi11g0454 11 2972216 2976327 Glsi11g0454 11 2972216 2976327 ECH