Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3415 ATGGCCGTTACTACTCCCTGCCTAAACGCTACAGAAAAGAAGCACTGGTGGCTCACCAACCGAAGGATTGTTGAGAAATACATTAAAGACGCTCGCAGCCTCATTGCGACCCAAGAACAGACAGAGGTCGCTTCGGCTCTGAACCTTCTAGACGCGGCTCTAGCCATCTCTCCACGCCTAGACCAAGCCCTTGAACTCAAAGCGAGGTCTCTGCTCTATCTCCGGCGGTTCAAGGAGGTCGCCGATATGCTTCAAGACTACATTCCCAGCCTGAAAATGGCAAACGAAGACTCCGGCTCCTTTTCTTCGGATAATTCGTCTCAGCAGCTTTCGAGGGAGGGGGTGAAGTTACTCTCGTCCTCTGACTTGCCGGGTCGGGATCCGAGTTTCAAGTGCTTCTCTGTCTCAGACTTGAAGAAGAGAGTCATGGCAGGACTCAGTAAAAGTTGCGAGAAGGAAGGGCAATGGAGGTACTTGGTTTTGGGCAAAGCATGCTGCCATCTAGGTCTAATGGAGGATGCAATGGTTCTTCTCCAAACGGGAAAACGCATTGCCAGCGCCGCCTTCCGCCGCGAAAGCGTGTGCTGGTCCGATGATAGTTTTTCTTTATCGAACATCCCTTTCTTCGGAGACACCGCCAACCCATCACCCACTACTCCGCCCCGAATACCTCTGACCGAGTCCGACAGTGTAACCCAACTCCTCAGCCACATTAAGCTCCTTCTCCGCCGTCGCACTGCGGCGCTCGCAGCCCTGGATGCTGGTCTCTACTCCGAAGCCATTCGACATTTCTCCAAAATAGTCGACGGCCGCCGTGGAGCCCCACAAGGCTTTCTTGCCGAATGCTATATGCACAGAGCCTCTGCCTACCGTTCCGCCGGTCGAATTGCAGAGTGCATTGCTGATTGTAATCGGACTCTGGCTCTTGACCCCTCTTGCATTCAAGCTCTTGATACCAGAGCTTCGCTTCTGGAAACAATTCGATGCTTGCCGGATTGCTTACACGATCTTGAACACTTGAAGCTTTTGTACAATTCAATACTGCGGGATCGCAAGCTTCCGGGCCCCGCTTGGAAGCGTCACAATGTGAGGTACAGAGAGATTCCTGGGAAACTGTGTGCGCTCACGACCAAAATTCAAGAATTGAAGCGGAGGGTCGCTTCTGGAGAAACTAGTAACGTGGATTACTATGCTCTGATTGGTTTGCGACGTGGGTGTTCTCGATCAGAGTTAGAGAGAGCTCATCTATTGCTCTGCTTACGACACAAGCCTGATAAAGCTACCAATTTTATCGAGCGCTGCGAGCTTGCGGACGAACGTGATCTTGAATCAGTTAAGGACAGAGCAAAAATGTCAGCTTTGTTACTGTACAGATTGCTTCAAAAGGGTTACACAAATGTAATGTCTACGATCATGGAGGAAGAAGCTGCTGAAAAGCAGAGAAAGAAGGCAGCAGCTACTTTACAAGCAGCAACTCAAGTCCAGCAAACAACTGAGTCCAGATTGGAGTCTGATTTGAATATCTCAGAGAAAATGGGTAGCAATCGGAGTAATTGTTCAGTGGAAAATAAACCCACAGTATCTTCGCCTACTGCGAATTCATCAGTTTTCCAAGGTGTATTTTGCCGTGATCTTGCTGTAGTTGGGAATTTACTTTCACAGGTGGGATTCAACCATCCAATTCCGGTGAATTATGAGGCATTAAGCTGCTAA 1713 0.4956 MAVTTPCLNATEKKHWWLTNRRIVEKYIKDARSLIATQEQTEVASALNLLDAALAISPRLDQALELKARSLLYLRRFKEVADMLQDYIPSLKMANEDSGSFSSDNSSQQLSREGVKLLSSSDLPGRDPSFKCFSVSDLKKRVMAGLSKSCEKEGQWRYLVLGKACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSDDSFSLSNIPFFGDTANPSPTTPPRIPLTESDSVTQLLSHIKLLLRRRTAALAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRASAYRSAGRIAECIADCNRTLALDPSCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKRRVASGETSNVDYYALIGLRRGCSRSELERAHLLLCLRHKPDKATNFIERCELADERDLESVKDRAKMSALLLYRLLQKGYTNVMSTIMEEEAAEKQRKKAAATLQAATQVQQTTESRLESDLNISEKMGSNRSNCSVENKPTVSSPTANSSVFQGVFCRDLAVVGNLLSQVGFNHPIPVNYEALSC 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3415 570 PANTHER OS01G0273500 PROTEIN 4 570 - -
Glsi02g3415 570 SUPERFAMILY Chaperone J-domain 391 429 IPR036869 -
Glsi02g3415 570 Gene3D Tetratricopeptide repeat domain 226 353 IPR011990 GO:0005515
Glsi02g3415 570 SMART tpr_5 280 313 IPR019734 GO:0005515
Glsi02g3415 570 SUPERFAMILY TPR-like 247 341 IPR011990 GO:0005515
Glsi02g3415 570 CDD DnaJ 395 429 IPR001623 -
Glsi02g3415 570 Gene3D DnaJ domain 380 530 IPR036869 -
Glsi02g3415 570 MobiDBLite consensus disorder prediction 499 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3415 Glsi-ChrGlsi02 81545488 81547833 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3415 02 81545488 81547833 Glsi11g0454 11 2972216 2976327 CCT
Glsi02g3415 02 81545488 81547833 Glsi02g3415 02 81545488 81547833 ECH