Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0406 ATGGTTGTGCCTTCTCGAACCAAGAAAACAAAGAGTGTGGGAATTCCGACCATCGACCTTTCCTTGGAAAGGTCAGACTTATCGGAACTAGTGGTACAAGCCTGCGACCAATATGGTTTCTTCAAGGTGGTGAACCATGGCGTGCCAAAGGAGGTCATTTCCAGATTGGAAGAGCAAGGGATTGAATTTTTCGCCAAACCCCTCTCACAGAAGCGGCAAGCAGCTGTCCCCGCTACTCCTTTTGGCTATGGTTGCAAAAACATCGGCTCCCATGGCGATATGGGTGATCTTGAGTATCTTCTTCTTCATACCAATCCTCTCTCCATCTCTGAGAATTCGAAAACCATCGCAAACGACCCTACCAAGTTCAGTTGTGCGGTGAATGATTATATCAAGGCAGCAAGGGAACTAGCATGCGAGATTCTTGATATCGTGGCCGAGGGTCTGTGGGTTCCGGACAAGTTGGCACTAAGCAGACTAATCAGAGACGTGCAGAGTGACTCAGTGCTGAGGATGAATCACTACCCTGCAATGAAGGGGAGGGAGAGGGACCCATCAAATTCAAAACATGAATTGAAGAACAACAATAGCATTGGGTTTGGGGAACATTCTGACCCTCAAATATTGACCATTTTACGGTCTAACAACGTGAGCGGGCTTGAGATCTCAACCCACGACGGGTTGTGGATCCCTGTGCCCCCTGACCCGAATGAATTCTTTGTGATGGTTGGCGACGCCCTGCAGGTATTGACGAATGGGAGATTTAGAAGCGTGAAGCACAGAGCATTGACCAACACGTGGAAGCCAAGAATGTCGATGATTTACTTTGGAGCACCACCACTGAATTCTTGGATCACTCCCCTCCCAATCATGGTGTCATCCCACAGTCCAACTCTCTATAAGCCCTTCACGTGGGCTCAATACAAGCAAGCCTCTTATTCTCTCCCACTCCGACACTCTCGCCTTGACCTCTTTAAGGCTAACCATCCCTGA 993 0.4874 MVVPSRTKKTKSVGIPTIDLSLERSDLSELVVQACDQYGFFKVVNHGVPKEVISRLEEQGIEFFAKPLSQKRQAAVPATPFGYGCKNIGSHGDMGDLEYLLLHTNPLSISENSKTIANDPTKFSCAVNDYIKAARELACEILDIVAEGLWVPDKLALSRLIRDVQSDSVLRMNHYPAMKGRERDPSNSKHELKNNNSIGFGEHSDPQILTILRSNNVSGLEISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFRSVKHRALTNTWKPRMSMIYFGAPPLNSWITPLPIMVSSHSPTLYKPFTWAQYKQASYSLPLRHSRLDLFKANHP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0406 330 FunFam Gibberellin 2-beta-dioxygenase 2 1 316 - -
Glsi11g0406 330 MobiDBLite consensus disorder prediction 176 190 - -
Glsi11g0406 330 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 287 IPR005123 -
Glsi11g0406 330 MobiDBLite consensus disorder prediction 176 197 - -
Glsi11g0406 330 PRINTS Isopenicillin N synthase signature 239 265 - -
Glsi11g0406 330 PRINTS Isopenicillin N synthase signature 31 48 - -
Glsi11g0406 330 PRINTS Isopenicillin N synthase signature 203 224 - -
Glsi11g0406 330 SUPERFAMILY Clavaminate synthase-like 6 315 - -
Glsi11g0406 330 Gene3D - 2 315 IPR027443 -
Glsi11g0406 330 Pfam 2OG-Fe(II) oxygenase superfamily 167 277 IPR044861 -
Glsi11g0406 330 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 311 - -
Glsi11g0406 330 Pfam non-haem dioxygenase in morphine synthesis N-terminal 15 88 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0406 Glsi-ChrGlsi11 2698302 2700728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0406 2 313 Glycosyltransferase AT5G59530 25.697 3.25e-25 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3460 02 81811595 81814663 Glsi11g0406 11 2698302 2700728 CCT
Glsi11g0406 11 2698302 2700728 Glsi11g0406 11 2698302 2700728 ECH