Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2025 ATGGAGGCGCCCTCCTTTGTTTCCAAAGCGAGGACTGCCTTCCATTCTGCTGCTGCGAAAGCGGAGCGTGTTCTTTCGGACTTCAAATCTGATCGAGATCCTGATAAACAATCGCCCGACAATTTGACAAGGCAAGAAAAAGATGAATCTCCTCAGAACGAGGGCGAGTCAAAGTTTCGCAGTGATTTCAAGAAGTGGAGACCTCCACATATAGGAATAAAGCAGGATTGGCAAGATAGAATAAAGAATATTCGGATAGGGAGAAAAGAGGTTGAAGATAGAGATAAAGTTGGTGATACAACCATGGCTTTTCCATTTTATGACGAAAACTTGTACATCCTGAATATGAAAAATGATCTTGAGGCCAAGGTTTCTGAAGCAATCCCCTCGGTTGAAGGCTTAACTGCTGCAACTAAAGACCCTATTCCTCCATCATCTGCACTGAAGCAGCTGGCAGTAGCTGTTGAGGCCGGAAAGAAAACAAAGTCATTGAAAGATCTCGTAACTTCATCACTAAATTCTTCGCCTGTCAAAGAGAAGGCCGGCTTAAGTCTTTCTGCCGTGAAGGCTTTAGTGTTGGGTGAAAAGGAGGACAAACTTACCTCTGAGTTTAGTAAAGACGAGAACGTTGGTTATTTGATTAATTCTTTATTTGATCCAGAGGGAGAATTCCTCAGAAGGAAGATCAACTTTGTTTCAGAGGAAATTGCCATAACATCTTTGCCAAGAGAAATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAATAATCGGAAATTTCAGAACCCTTCGAAAAATGGCTCTGTTTTGGTGCAGGGTTGTTGTTGAAATGCGAAAACTTTGGTATGAGGAACAACACTTACCCGGAGTCCCCCAGGATGAGATTCCAGATCTTAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAGAAGGCGTCGTATTATTGCCACTGAAGCTATGGATATCTTGATGGAAAGTAGTTCAAATATTGAAGAATCATCTGAATATAGTGACATCATTCCGGAAAGCCCTGTTCTATATGCTCGATTAAGTGCTGGGGAGCTTGTTCTTCGACTTGGTGCTGATTGCCCATCTGGAGATCTGACATTGTTAGAAACTGGCGAGCCTGTGTACTCTCCTATCATGCAGGAAGGACCTTTGCTTACAGAAGATCTGATCAAAGAAAATGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTCCTCTCCGATATGCAGGCTTTCAAGGCTGCAAACCCTGGTTGTATATTGGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAAAGTGAACCAAGTACTGAGGCTCAAGATTCTTCTGATGGTGGTGACCCTGGTGAGTCATTGTCCACCAGAGGTTACCTAAGCCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGGGAATTGTGGGAAACATCTAAACCAGTACCAGCTGTTAAACAGTCACCTCTCTTTGATGAGGATCTAGCAGTGGAGGGCATCCTGAATGCTTTTGAGGATATCCAGCCTTCTGAGCTTTTTGAACAACTGTTTCTTTCTTTACTTGGTTTAGGATTTGCGATTGCTGAACCTCTGCTGTCTGGTATCAGTGACTTCTCTAAGTTGTTCTTTGACTGCAAGGATTACGTAGTTGCTACCTGTCAAGGCAGCAGTTGGAGTGAGAAAGTCGATGAACTCTGCCAGGTATATGAAACAGTGGAGACTATGTTAATAAGGCCTGAGGAAGCACTAAAGATGACCAAGCAGACTGAAGAATCACCTACGTCTCCCAGTGAACCAAAGCATCGGTTTAAGAGGCTTGGCTTTATCTTTGGTGGCAAACAGAAACCAGCAAGAAAAGCCATCTCCAAAGACCAGATAAACTCTGAAAGGCAATCTTTTTCAAGTTTCTTTGACAGCAAATCATCTGTATTTGCAAGGAAGACTCCTAAGCCTGGAAGCCCTTCCCTGGCTGAGAAACCACCAAGTCCAGAAAGTGATTGGACAGTTGTTTCGACAAAGTTCTTATGA 2085 0.435 MEAPSFVSKARTAFHSAAAKAERVLSDFKSDRDPDKQSPDNLTRQEKDESPQNEGESKFRSDFKKWRPPHIGIKQDWQDRIKNIRIGRKEVEDRDKVGDTTMAFPFYDENLYILNMKNDLEAKVSEAIPSVEGLTAATKDPIPPSSALKQLAVAVEAGKKTKSLKDLVTSSLNSSPVKEKAGLSLSAVKALVLGEKEDKLTSEFSKDENVGYLINSLFDPEGEFLRRKINFVSEEIAITSLPREIHGAPPESLVVKLAEIIGNFRTLRKMALFWCRVVVEMRKLWYEEQHLPGVPQDEIPDLKSCLLYQQFQVINCCISRRRRRIIATEAMDILMESSSNIEESSEYSDIIPESPVLYARLSAGELVLRLGADCPSGDLTLLETGEPVYSPIMQEGPLLTEDLIKENEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTESEPSTEAQDSSDGGDPGESLSTRGYLSRRMQKEGNLWRELWETSKPVPAVKQSPLFDEDLAVEGILNAFEDIQPSELFEQLFLSLLGLGFAIAEPLLSGISDFSKLFFDCKDYVVATCQGSSWSEKVDELCQVYETVETMLIRPEEALKMTKQTEESPTSPSEPKHRFKRLGFIFGGKQKPARKAISKDQINSERQSFSSFFDSKSSVFARKTPKPGSPSLAEKPPSPESDWTVVSTKFL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2025 694 MobiDBLite consensus disorder prediction 633 694 - -
Glsi10g2025 694 MobiDBLite consensus disorder prediction 23 65 - -
Glsi10g2025 694 MobiDBLite consensus disorder prediction 645 667 - -
Glsi10g2025 694 Pfam Rab3 GTPase-activating protein catalytic subunit 369 524 IPR026147 -
Glsi10g2025 694 MobiDBLite consensus disorder prediction 449 479 - -
Glsi10g2025 694 MobiDBLite consensus disorder prediction 452 471 - -
Glsi10g2025 694 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 17 692 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2025 Glsi-ChrGlsi10 14422010 14431292 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0076 08 697803 707409 Glsi10g2025 10 14422010 14431292 CCT
Glsi10g2025 10 14422010 14431292 Glsi10g2025 10 14422010 14431292 ECH