Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0076 ATGGTTGCGCTCTCATTTGTCTCCAAAGCGAGGTCCGCCTTTCATTCTGCGGCTGCGAAAGCCGAGCGAGCTCTCTTGGAGTTCAAATCCGAGCGAGATGATGAAGAATCGCCCAACAGTCTGACCAGGCAAGCTGAAGGTGAATCTCCTCAGAACGAGAGCGAGTCAAAGCTTCACAGTGAATTGAGGCATATAAAGTGGAGACATGCATATACAGGAATAAAGCAGGATTGGCAAGATAGGATTAAGAACATTCGAATAGGGAGAAAAGAAGTTGAAGATACAGATAAAGTTGGGGATACGACCATGGCTGTTCCATTTCATGATGAGAATCTGTACATTGTGAATATGAAAAATGATATTGAGGCCAAGGCTTCAGAAGCAGTTCCCTCGGTTGAAGGCTTAACTGCTGCAACTAAATATCCCATTCCTCCATCATCTGCGCTGAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGGAAAATGAAGTCTATGAAAGATTATATAGCTTCATCAAGAGGTTCTTCACCTGTTCGAGAAAGGGCAGGCTTAAGTATCTCTGCAGTGAAGGCTTTAGTTTTGCGTGAAAGGGAGGACAAGCTTACCTCTGAGTTTAGTAATGATGATAAAGTTCTGTATCTGATTAATTCTCTGTTTGATCCAGAGGGAGAATTCCTCAGAAGGAAGATCAACTATGGTTCAGAGGAAACCAACATATCATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTCATTGGAAGCTTCGGGAACCTTCGAAACATGGCTCTGTTTTGGTCCAGGGTTGTTGTTGAATTGAGAAAACTTTGGTCTGAGGGTCAACATTTACCCGGAGTCCCCTTGGATGAGATTCCTGATCTGAAGTCATGTCTCCTCTATCAACAATTTCAAGTAATCAATTGTTGCATCTCTCGGAAAAGGCACCATATTATTGCCACCAAATCTTTGGACTCTTTGTTGGTACAAGCCAGTTCAGATTTAGATGAATCAGTTGATTATAATGAAAGAATTACTTCAAGCCTTGATCGATATGCTAGATTAACTTCTGGGCAATTTGTTGTTCGACTTGGAGCTGATTGCCCTTCTGGAGATCTGACATTGTTGGAAACTGGCCAGCCTGTGTACTCTCCTGTCACACTGGAAGGACCTTTGCTTACAGAAGATCTGATCAAAGAAACAGAGGAGTTTGTGTTGCGGACAGGAAGTGTTGGCGCTGGGTGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGCTGTATTTTGGAAGATTTTGTAAGATGGTACTCTCCACCTGATTGGACAGAAAGTGAGCCAAGTACTAAGGCTAAAGAATCTTTAGATGATGGAGAGTCATTGTCTTCCAGGGGTCAGCTAAGTCTACGGATGCGAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAGCAGCTAAACCAGTGCCAGCTGTTAAACAGGCACCTCTCTTTGATGAGGATTTGGCAGTGGAGGGCATCCTGAATGCTTTTGAGGACATCCAGCCTTCTGAGCTTTTTGAACAACTGTTTATTTCTTTACTTGGTTTAGGATTTGCAATTGCTGAACCTATGCTATCTGGTAACAATGACCTCTCAAAGTTGTTCTACGACTGCAAGGAGTACGTGGTTATCACCTGTCAAGGCAACAGTTGGAATGAGAATGTTGATGACCTTTGCCAGGTATATGAATCGGTGGAGACAATGTTGCTGAATCCTGAGGAAGCAGTAAGGATGATGAAGCAGGCTGAAGAATCAACTATGACTACTTGTGAACCTAAGCGTCGTTTTAAGAGGCTTAGCCTTAACTTTGGTGGCAGAGATAAACTGTTAAGAAAGCCTGTCTCAAAATTCAAGATAAACAATGAAGAAAACCCAATTCGACAATCATTTTCAAGTTTCTTTGACAACAAGTCATCTTTATTTTCAAATAAGCCTCCCAAGCCTGAAAGCACATTCCCCGCTGAGAAACTTCCTTGTCACGAAAGTGATTGGACAGTTGTTTAG 2079 0.4291 MVALSFVSKARSAFHSAAAKAERALLEFKSERDDEESPNSLTRQAEGESPQNESESKLHSELRHIKWRHAYTGIKQDWQDRIKNIRIGRKEVEDTDKVGDTTMAVPFHDENLYIVNMKNDIEAKASEAVPSVEGLTAATKYPIPPSSALKQLAIAVEAGRKMKSMKDYIASSRGSSPVRERAGLSISAVKALVLREREDKLTSEFSNDDKVLYLINSLFDPEGEFLRRKINYGSEETNISSLPRDIHGAPPESLVVKLAEVIGSFGNLRNMALFWSRVVVELRKLWSEGQHLPGVPLDEIPDLKSCLLYQQFQVINCCISRKRHHIIATKSLDSLLVQASSDLDESVDYNERITSSLDRYARLTSGQFVVRLGADCPSGDLTLLETGQPVYSPVTLEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTESEPSTKAKESLDDGESLSSRGQLSLRMRKEGNLWRELWEAAKPVPAVKQAPLFDEDLAVEGILNAFEDIQPSELFEQLFISLLGLGFAIAEPMLSGNNDLSKLFYDCKEYVVITCQGNSWNENVDDLCQVYESVETMLLNPEEAVRMMKQAEESTMTTCEPKRRFKRLSLNFGGRDKLLRKPVSKFKINNEENPIRQSFSSFFDNKSSLFSNKPPKPESTFPAEKLPCHESDWTVV 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0076 692 Pfam Rab3 GTPase-activating protein catalytic subunit 370 523 IPR026147 -
Glsi08g0076 692 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 136 690 IPR045700 GO:0005096|GO:0043547
Glsi08g0076 692 MobiDBLite consensus disorder prediction 27 59 - -
Glsi08g0076 692 MobiDBLite consensus disorder prediction 27 41 - -
Glsi08g0076 692 MobiDBLite consensus disorder prediction 453 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0076 Glsi-ChrGlsi08 697803 707409 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0076 08 697803 707409 Glsi10g2025 10 14422010 14431292 CCT
Glsi08g0076 08 697803 707409 Glsi08g0076 08 697803 707409 ECH