Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1683 ATGGTGTTGAAGAAGAGGCTAGATTATGGATTCAATGGCTTTCAGGTCCCCTTTATACCTAGAGCTCCTAGATCTGTAAGAAGGAGGGTTCTTTCCAAGAAAGCAGATGAGGATGGTCAAGTTTGCGCTATTGAAGTACTGGCATCTTTAGCTGGCAAGTTGTTGCGGGAGAGTGAAAGTTCTGCTTCTAGTAATGCTTCTGAAGGAAATCGTCGGCCTGCCTTTGGCCAAGGTTTTGTTGAGCAGGAAAGTCAAGGTGAAGCTAAACCATTAGTAACAGAAGGTACTCATCAAGGAAGTTGTGCAGAGAGTATTTTTATGACCGAGGTAGAATCACAAAATACTAGTAAGAAATGTCTTGTGCAAGCTGATACTGATGCTGTACTTGAGAATACTTCTGTTACTAATCATGTTGACTGCTGTGAGAAAATTGAACCGGACCGTAAGTCTGAAACCTGCAAATGGGAGAATAAATTTGGACATTGTTCTAGTAGATTAGCAAAAGCACCCCAAAATTTTAGGGGGTTTTGTAATGATAATATAAAGAATGGATTTAGACGGGAACAAGAAGCTGGGAGTTCAGGCATAGAGGGACCACGTTCAGCTAATAAATGTAGTTTGAAGGATCCATTGGAATTATATGTTAACTCTCGTGCCCTAATTGACTCAGATAGGAAAGTTAAATCTCCATTCTGTAAAGAAACTTTTCCCAGTGGTTCCTATTCTAGGTATGACAATAATATTAAGTTAGGTTTTAGAGATGATGACGAAAATTTTAAAAGGTGCAATAATATTAGAACCAAGTCAAAGGCTTTTAGGCCTTCGCAACGATTTGCACATCGAAGAATCAGGAAGCTGCTGACTTCCAAATACTGGAAGGTTGCTCCAAAGTTGAAGGATTTTGAACTTTATAGATCAGATCTGGGAGTAAAACCTCTTTATCGGAAGAGGAAGATGGGTTACAATTTCAAAAGACGTCAGCATGACACTCTTTTCAAGAGAAGGAAATTCTTTAACCGGGGTTCAGGTCTAACTTCAGACGGAGGGTTCAGCAGTGAGAGTGTATCTAATTCACTTGAGAAAGGGATGGATGGAGGCAACCCTAGCTCATCTGTTAAACAGCATGTATCAAAGAATTCTCATGTGAAGTTTAGCATTAAGTCATTCAAGATACCAGAGCTTTATGTTGAAGTTCCTGAAACTGCAACTGTTGGTTCACTAAAGAGGTCAGTCATGGAGGCAGTGATGGCCATACTTGGAGGTGGAGTGCATGTTGGTGTTCTTCTTCAGGGGAAAAAGGTTAGAGATGACAATAGAACTCTTCACCAGACTGGTTTGTCTAGTGAAGAAAATATCGATACCCTCGGTTTCATGCTGGAGCCCAGTTCTTTACAAGCTTCTCCAGCTGTATGTGCTGGTGATCCTTCTTCTCAATGTGAAACATCCCAGTCAACCAGGTCCCCAGGAACTCCTATCTTAGATTCTGGGATTTCTGACGTCTTACGTGACTCCTCCTTGCTGCCTAATATGGGCAACCTTGTTGAAAGTAACCATGAGTCCATTTCTTCCCCCACTGACACCATGATTGACAAAATAACACCAGATTCCAGAGCTCTAGTTGCTGTTCCAGCTAGGAGCACAGAAGCATTGGCTGTGGTTCCTCTGAGTCATAAAACTAGGCGCTCTGAGCTTGTACAGCGCCGAACAAGGAGACCCTTCTCTGTGTCTGAGGTAGAAGCACTTGTTCAGGCTGTTGAGGAACTTGGAACTGGAAGGTGGCGTGATGTCAAGTTGCGTGCTTTTGAGAACGCAGATCACAGAACTTATGTAGACTTGAAGGATAAATGGAAAACATTAGTTCACACAGCAAGAATCTCCCCACAACAAAGGAGGGGAGAGCCAGTGCCGCAGGAGCTGTTGGACAGGGTGTTGGCTGCCCATGCTTTCTGGTCTCAGCATCAAGCCAAGCAGCAGCATGGAAAGCACCAAGGCTCTGCTTCAACTATGAAGATCACAGAAGCCTCAGCTGAAGGGGTCAGTGGTGATCAAGGTATCCACAAACCAATCGAGATGATGTAA 2079 0.4315 MVLKKRLDYGFNGFQVPFIPRAPRSVRRRVLSKKADEDGQVCAIEVLASLAGKLLRESESSASSNASEGNRRPAFGQGFVEQESQGEAKPLVTEGTHQGSCAESIFMTEVESQNTSKKCLVQADTDAVLENTSVTNHVDCCEKIEPDRKSETCKWENKFGHCSSRLAKAPQNFRGFCNDNIKNGFRREQEAGSSGIEGPRSANKCSLKDPLELYVNSRALIDSDRKVKSPFCKETFPSGSYSRYDNNIKLGFRDDDENFKRCNNIRTKSKAFRPSQRFAHRRIRKLLTSKYWKVAPKLKDFELYRSDLGVKPLYRKRKMGYNFKRRQHDTLFKRRKFFNRGSGLTSDGGFSSESVSNSLEKGMDGGNPSSSVKQHVSKNSHVKFSIKSFKIPELYVEVPETATVGSLKRSVMEAVMAILGGGVHVGVLLQGKKVRDDNRTLHQTGLSSEENIDTLGFMLEPSSLQASPAVCAGDPSSQCETSQSTRSPGTPILDSGISDVLRDSSLLPNMGNLVESNHESISSPTDTMIDKITPDSRALVAVPARSTEALAVVPLSHKTRRSELVQRRTRRPFSVSEVEALVQAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQQHGKHQGSASTMKITEASAEGVSGDQGIHKPIEMM 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1683 692 SUPERFAMILY Ubiquitin-like 378 463 IPR029071 -
Glsi10g1683 692 SMART sant 569 622 IPR001005 -
Glsi10g1683 692 MobiDBLite consensus disorder prediction 469 492 - -
Glsi10g1683 692 SUPERFAMILY Homeodomain-like 571 652 IPR009057 -
Glsi10g1683 692 MobiDBLite consensus disorder prediction 467 495 - -
Glsi10g1683 692 MobiDBLite consensus disorder prediction 347 376 - -
Glsi10g1683 692 CDD SANT_TRF 571 621 - -
Glsi10g1683 692 Gene3D - 558 662 - -
Glsi10g1683 692 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 566 624 IPR017930 -
Glsi10g1683 692 ProSiteProfiles Myb-like domain profile. 565 620 IPR001005 -
Glsi10g1683 692 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 662 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1683 Glsi-ChrGlsi10 11357573 11361073 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0633 08 5060779 5063839 Glsi10g1683 10 11357573 11361073 ECH
Glsi10g1683 10 11357573 11361073 Glsi10g1683 10 11357573 11361073 ECH