Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0633 ATGGTCATGAAGAAGAGGCTAGATTATGGATTCAATGGCTTTCAGGTCCCCTTTATACCTAGAGCTCCTAGATCTGCAAGAAGAGGAAGTCCTTCTAAGAAAGCAGCTGAGGATGGTCAAGCTTGTGCTTTCGAACTGCTTGCGTCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCTTCGGCTTCTAGCAATGCCTCTGAAGGAAACCATCAACCTTCCTTTAGCCTAGGTGTTGTTGAGCAGGAAAGGCAAGACAAAGTTAAGCCATTAATAACAGAGGGGATTCATCAGAAGGGTTGCACAGAAAGTATTTATATGACAGAGGTTGCCTCGCAAATCGCAAGTCAGAAATGTCTTGGGCAAGTTGAGAGTGATGCCGTACTAGAACAGACCTCAGTTAATAATAATAATTCTGACTCCTGGGGGAAAGTTGAAGCTGATGTGAAGTCTGAAATTTGCAAACTAGGGAATAAATTTGGACATTATTCCAGTAGATTAGTAGAAGCATCCCAAGATTTTAGGGATTCTTCTGATGGTAATATTAATGGATTCAGACGAGAACAAGAAGCCGGGAGTTCAGGCTTTGAGGAATCAACTTTGGCTGACAAATGTAGTTTGAAGGATCCATTGGAATTGTGTGTTAACTCTCCTGCACTTGTTGACTCAAACAGTAATGTTAAATCTCCATTTGGTAGGGAATCTTTTCCTGATGCTTCCTTTTCCAGGCACGGGAATGATGTTAAGTTAGATTTTAGAGATGATGACGAAAACTTTTTAAGGTGCAACAAAATTAGCACCAAGTCAAAGCCTTACAGGTCTCCACAACGAATTGCACACCGAAGAATCAAGAAGTTGATGACTTCTAAATATTGGAAGGCTACTCCAAAGTTGAAGGATTGTGAACTTTCTGGATCTGATTTAGGAGTAAAACCTCATTATCGTAAGAGGAAGACTTTTTACAACTTTGAAAGATGTCAGCACAATACTTTTTTCAAGAGGAGGAAAATCTTTGACCACAGTTCTGTTGTAACTTATGATGGAGGAGGGTTCAGCAGTGAGAGTGTATCTAATTCACCAGAGAAAGGAACGGATGGAGATAACCCTAGCTCATCTCCAAATCTGCGTGTATCTAAGGATTCTCATGTGAAGTTTAGCATCAAGTCATTCAGGATACCAGAACTTTATATTGAGGTTCCCCAAACTGTAACGGTTGGTTCACTAAAGAGGACTGTCATGGAGGCAGTGATGGCTATACTGGGAGGTGGAGTACGTGTTGGTGTTGTTCTTCAGGGGAAAAAAGTTAGAGATGACAATAGAACTCTTGTGCAGAGTGGTATATCCTGTAAAGAAAATATGGATACCCTTGGTTTCACTTTGGAGCCCAGTTCTTTACAGGCTCCTCCAGTTGTATGTGTTGGTGATCCTTCTTCTCATTGCGAAACACCCCGACCTACCAGATCACCAAGAACTCCTGTCTTAGATTCAAGGATTACTGATGCTTTACGAGACTCCTTGCTGACAAATACAGGCAATCTTGTTGAAAGTAACTATGAGTCAATTTCTTCCCCCACTGACACTATAGCTGACAAAATAACACCAGATTCCTTAGCGCTGGTTCCTGTTCCAGCCAGGAGCACAGAAGCATTAGTTGTGGTTCCTGTGAGTCAGAAAACCAGGCGCTCTGAGCTTGTACAGCGTCGAACAAGGAGACCATTCTCTGTGTCTGAGGTAGAAGCACTTGTTCAGGCAGTTGAGGAACTCGGAACTGGAAGGTGGCGTGATGTGAAGTTACGTGCTTTTGAGAATGCAGACCATAGGACTTATGTAGACTTGAAGGATAAGTGGAAAACATTAGTGCACACAGCAAGAATCTCCCCTCAACAAAGGAGGGGAGAGCCAGTTCCCCAGCAGCTCTTGGACAGAGTCTTGGCTGCCCATGCTCACTGGTCTCAGCATCAAGCCAAGCAGCATGGCAAGCATCAACCTGGAACTATGAAGATCGCAGAAGCCTCAGCTGAAAGACACAGTACTGTTGGAGATGTCCAACCACTTGTGATGGTGTAA 2070 0.4324 MVMKKRLDYGFNGFQVPFIPRAPRSARRGSPSKKAAEDGQACAFELLASLAGKLLQESESSSASSNASEGNHQPSFSLGVVEQERQDKVKPLITEGIHQKGCTESIYMTEVASQIASQKCLGQVESDAVLEQTSVNNNNSDSWGKVEADVKSEICKLGNKFGHYSSRLVEASQDFRDSSDGNINGFRREQEAGSSGFEESTLADKCSLKDPLELCVNSPALVDSNSNVKSPFGRESFPDASFSRHGNDVKLDFRDDDENFLRCNKISTKSKPYRSPQRIAHRRIKKLMTSKYWKATPKLKDCELSGSDLGVKPHYRKRKTFYNFERCQHNTFFKRRKIFDHSSVVTYDGGGFSSESVSNSPEKGTDGDNPSSSPNLRVSKDSHVKFSIKSFRIPELYIEVPQTVTVGSLKRTVMEAVMAILGGGVRVGVVLQGKKVRDDNRTLVQSGISCKENMDTLGFTLEPSSLQAPPVVCVGDPSSHCETPRPTRSPRTPVLDSRITDALRDSLLTNTGNLVESNYESISSPTDTIADKITPDSLALVPVPARSTEALVVVPVSQKTRRSELVQRRTRRPFSVSEVEALVQAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQQLLDRVLAAHAHWSQHQAKQHGKHQPGTMKIAEASAERHSTVGDVQPLVMV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0633 689 SUPERFAMILY Homeodomain-like 572 653 IPR009057 -
Glsi08g0633 689 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 664 IPR031105 -
Glsi08g0633 689 SMART sant 570 623 IPR001005 -
Glsi08g0633 689 CDD SANT_TRF 572 622 - -
Glsi08g0633 689 ProSiteProfiles Myb-like domain profile. 566 621 IPR001005 -
Glsi08g0633 689 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 567 625 IPR017930 -
Glsi08g0633 689 Gene3D - 559 663 - -
Glsi08g0633 689 MobiDBLite consensus disorder prediction 355 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0633 Glsi-ChrGlsi08 5060779 5063839 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0633 08 5060779 5063839 Glsi10g1683 10 11357573 11361073 ECH
Glsi08g0633 08 5060779 5063839 Glsi08g0633 08 5060779 5063839 ECH