Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1425 ATGGGTGAGGAAGGTAAACAGGAACAACTCAAGGCAGAGGCCAAACCAGAGGAAAGGAAAGAAGAGAAAGCAGAGGAAAAGCCAGCGGAGGAGAAAAAGGAAGAGCCTAAACCACCATCACCCTGTGTGCTGTTTGTAGACTTACATTGTGTGGGATGTGCCAAGAAAATTGAGAAATCCATAATGAAAATGAGAGGAATTGAGGGAGTGGTCATTGATATGTCTAAAAATGAAGTGACCATAAAGGGAATAGTGGAGCCTCAAGCAATCTGCAACAGAATTATGAAGAAAACAAAGAGAAGAGTCAAAATTATATCTCCATTGCCTGCAGCTGAAGGAGAACCTATACCAGAGGTTGTTACTTCTCAGGTGAGTGAACCAGTAACTGTGGAGCTTAATGTAAACATGCACTGTGAGGCCTGTGCTGAGCAACTCAAAAGGAAGATACTCAAAATGAGAGGAGTGCAAACAGCCGTGACAGAGCTGAGCACAGGGAAGGTTACTGTGATAGGGACCATGGATGCAAACAAACTAGTGGATTATGTGTATAGACGCACCAAAAAGCAAGCCAAAATAGTTCCACAGCCAGAGCCTGAACCTGAACCAGAAAACAAGGAAGCTGAGAAAGAAAAACAAGCAGAAGAGGCTAAACCTGAAGAAAAGAAAGATGAGGAGAAACCACCAGAGGAACCCAAGAAAGAGGACGGCGATGGAAGTGGTGAAAATAAGAGTGAGAATAAAGAAGAAGAGGGAGAACAAATTGAGGTGGTTAACGTTGATGAGGAAGGGATGAAGAGGATGATGTACTATTACCAGCAGCCACTGTACGTGATTGAAAGGATCCCACCTCCTCAGCTCTTCAGTGATGAAAACCCCAATGCATCTCTTATCTTTAAGACAAACCAAACAAGAAAGATGATAATGGTGGTGGTTATGACGGAGATATTGGGAGAATACACGGCGGCGCTGACAAGGGTGACGGAGCGCCTCCTTCCACGGCGTAACTTACGTCTCAGCGCTCTCAGGAATCTTCGTTTTGCTTCTTCAACCTCGTCTTACGAAGCAGATTCTTTTCTGGTTTACTTCTAG 1089 0.4435 MGEEGKQEQLKAEAKPEERKEEKAEEKPAEEKKEEPKPPSPCVLFVDLHCVGCAKKIEKSIMKMRGIEGVVIDMSKNEVTIKGIVEPQAICNRIMKKTKRRVKIISPLPAAEGEPIPEVVTSQVSEPVTVELNVNMHCEACAEQLKRKILKMRGVQTAVTELSTGKVTVIGTMDANKLVDYVYRRTKKQAKIVPQPEPEPEPENKEAEKEKQAEEAKPEEKKDEEKPPEEPKKEDGDGSGENKSENKEEEGEQIEVVNVDEEGMKRMMYYYQQPLYVIERIPPPQLFSDENPNASLIFKTNQTRKMIMVVVMTEILGEYTAALTRVTERLLPRRNLRLSALRNLRFASSTSSYEADSFLVYF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1425 362 SUPERFAMILY HMA, heavy metal-associated domain 124 188 IPR036163 GO:0046872
Glsi10g1425 362 Gene3D - 41 103 - -
Glsi10g1425 362 Gene3D - 124 192 - -
Glsi10g1425 362 ProSiteProfiles Heavy-metal-associated domain profile. 127 191 IPR006121 GO:0046872
Glsi10g1425 362 Pfam Heavy-metal-associated domain 44 94 IPR006121 GO:0046872
Glsi10g1425 362 Pfam Heavy-metal-associated domain 133 179 IPR006121 GO:0046872
Glsi10g1425 362 MobiDBLite consensus disorder prediction 1 39 - -
Glsi10g1425 362 CDD HMA 131 171 IPR006121 GO:0046872
Glsi10g1425 362 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 297 IPR044258 GO:0046872
Glsi10g1425 362 CDD HMA 48 103 IPR006121 GO:0046872
Glsi10g1425 362 ProSiteProfiles Heavy-metal-associated domain profile. 39 102 IPR006121 GO:0046872
Glsi10g1425 362 Coils Coil 7 27 - -
Glsi10g1425 362 MobiDBLite consensus disorder prediction 1 38 - -
Glsi10g1425 362 Coils Coil 204 224 - -
Glsi10g1425 362 SUPERFAMILY HMA, heavy metal-associated domain 43 97 IPR036163 GO:0046872
Glsi10g1425 362 MobiDBLite consensus disorder prediction 189 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1425 Glsi-ChrGlsi10 9629483 9636514 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1425 10 9629483 9636514 Glsi08g0887 08 6591147 6593062 CCT