Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1216 ATGGCATTCTCCGTCGACATGAATCTCCTCCCACCGCCGGTGACCGGAGTATTCTCACCTTCATATCTTTGTTTCTTTAAGCCCCCTCTGCCCTCGGGCAATTGCAGAATCTTCGGTTTCGGGTTGAGGCTCGGGTTCGAGTGGCAGAGGAATAAGGGGAGACAAAGGAGACAGCTCAAGTTCGTTATCAGCGCGGACCTTTCCAAGTCAATTTCGTTGAATTTCGGATTGGACTCTCAGATCTTGAATGGTCTCCAATCCCATGATCCATCGCATCTGCCTTGGATGGGTCCAGTTCCGGGTGATATTGCCGAAGTTGAGGCATATTGTAGGATCTTTAGGAGTTCAGAAAGGCTTCACTCCGCATTAATGAATGCTTTATGCAATCACTTGACTGGTGAATGCAGTGTCTCATATGAGGTCCCATCAGACGAGAAACCTCAACTTGAAGATAAAATAGTCTCTGTCCTTGGATGTATGGTATCCCTTATGAACAAAGGTAGGGAGGATATTCTTTCTGGAAGATCCTCAGTAATGAATTCCTTTCCGATTTCAGAGGCAAATATAATGGAGGATAAGCTCCCTCCACTTGCCATTTTTAGGAGTGAGATGAGAAGGTGTTGTGAGAGCTTGCATGTAGCTCTTGAGAACTATTTGATGCCTGATGATGATCGAAGCATAGATGTGTGGAGGAAACTTCAGAAACTGAAGAATGTTTGCTATGATTTAGGTTTTCCTCGTGAAGAGGATTATCCTTGCCATACTTTATTTGCAAATTGGAGTCCTGTTCATTTAGCTACTTCTACAGAGGACATAGAATCCGAAGATTCTGAGGCAGCTTTTTGGACAGGTGGCCAAGTGACAGAAGAAGGCTTGAAATGGTTACTGGATAAAGGATATAAAACCATTATAGATCTCAGAGCAGAAACTGTGAAAGATAATTTCTATCAAGCAGCCGCTCATGATGCTATTTCCTCTGGGAAAATCAAAGTGGTCAGAATCCCAGTTGAAGTTAGGACTGCACCTACCATGGAACAGGTTGTAAGGTTTGCATCTTATGTTTCTGATCGCAGCAAAAGGCCCATCTATCTTCACAGCAAGGAAGGAGTCTGGAGAACATCTGCGATGGTCTCCAGATGGAGGCAGTACATGACTCGCTCTACATCACAGCTTGTTTCTAATCAAGTAGTTAGTTCCAATGACATGGTATCATGCTATACAAATGGATCGAGAAATCTTCAGAATTCTTCAGTGACTGCAAACAGATCCATTCTTGAAAATGATATTGATTCATTGCAAGAGAATCTAGATGCAAGACATAGTTATGTTGGAATATTTGACAAAAGTTCCTCTTCAAAGAAGGATAACAAAGAGATGCTAAGTGATGGGGGTTTGAGTGGATCTATTTCTGAAGATAAGACGCTATCGGAAACCCCTTCTACTCCTTCTGGGGCAGGATCTCTTTCAAATTTCTCCAGCAAGACTAACCCTTTAAAAGCTCAGGTTCCTCCTTGTGATATCTTTTCCAGAAAGAAGATGTCCAACTTTCTTGGAAATAGGATGATCTCACCACCCTCTTATATTAGTTATCAGATTAGAGAATCGGAATGCTTACTGGATTCAAAACACATTCCTAAAGAAAAATTGCAGGGGGGAGCGAATATCAGCAATGTTGATAATCCCTTACCCAGACTTGTGGGCCCAAGAAGTTCCAATGGGTCTGCTCATGTGGATTATCCTTATGGAGGGGGCCAGGTTACGTTTGATGGCAATAGGAATTTAATGAAAGGAAGTACTCCTAGTTCTGTGAGGACAACGGTAAATGGATCTAGTGATGGGGAAATGTATCCCAGGATTAATACCAATGTCTCGACCACTATGAGTAATGACTTCGATCACGTCACAAGTAAATCTCAAAAGGTTGGAGACAGCATAGGTGAGGCTAGGTTAGCCTTAGGTGATGAAGATTTGGGACCCATTGAAAGGAATATGTGTGTTTCTTCAACAGGTGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTCCTAGTACGAACAGATGGATACTCTTGTACCAGAGAAAAGGTGACTGAATCCTCTTTGGCTTTCACTCACCCTAGCACACAGCAACAGATGCTTATGTGGAAATCTACACCAAAGACTGTATTATTGTTAAAAAAACTGGGGGAAGAATTGATGGAAGAAGCAAAAGAGGTGGCCTCTTTTTTATATCACCAAGAAAAAATGAATGTTGTTGTGGAACCTGAAGTACATGATATATTTGCTAGAATTCCGGGGTTTGGATATGTTCAGACTTTCTATAGTCAAGATACCAGTGATCTACATGAGAAAGTAGACTTGGTGGCGTGTTTGGGGGGAGATGGTGTTATACTGCATGCTTCAAATCTATTTAGAGATGCTGTTCCCCCTGTTGTTTCGTTCAACCTTGGCTCTCTTGGTTTTCTAACATCTCATAGATTTGAAGACTATAGGCAAGACTTACGACAAGTCATTCATGGAAATTATACACGAGATGGTGTATACATCACTCTCAGAATGCGTCTCAGATGTGAAATTTTTCGTAAGGGTAAAGCTGTGCCAGGGAAAGTATTTGATATTCTTAATGAGGTTGTCCTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAGTGTTATGAACATGATCGATTGATTACCAAGGTACAAGGCGATGGAGTCATTGTGGCCACCCCTACAGGAAGTACTGCCTATTCTACTGCTGCTGGAGGTTCTATGGTCCATCCAAACGTTCCCTGCATGCTGTTTACTCCAATCTGTCCACATTCACTGTCATTTAGACCAGTTATACTTCCAGATTCTGCTCGACTTGAATTAAAGATTCCAGAAGATGCAAGAAGCAATGCATGGGTTTCATTTGATGGGAAGAGAAGGCAGCAACTTTCTAGAGGAGATTCTGTCCGAATATATATGAGTCAGCATCCGCTTCCAACTGTTAACAAGTTTGACCAAACAGGGGATTGGTTTCATAGCTTGATTCGCTGCCTAAATTGGAATGAAAGGCTTGATCAAAAGGCCCTATAA 3087 0.4208 MAFSVDMNLLPPPVTGVFSPSYLCFFKPPLPSGNCRIFGFGLRLGFEWQRNKGRQRRQLKFVISADLSKSISLNFGLDSQILNGLQSHDPSHLPWMGPVPGDIAEVEAYCRIFRSSERLHSALMNALCNHLTGECSVSYEVPSDEKPQLEDKIVSVLGCMVSLMNKGREDILSGRSSVMNSFPISEANIMEDKLPPLAIFRSEMRRCCESLHVALENYLMPDDDRSIDVWRKLQKLKNVCYDLGFPREEDYPCHTLFANWSPVHLATSTEDIESEDSEAAFWTGGQVTEEGLKWLLDKGYKTIIDLRAETVKDNFYQAAAHDAISSGKIKVVRIPVEVRTAPTMEQVVRFASYVSDRSKRPIYLHSKEGVWRTSAMVSRWRQYMTRSTSQLVSNQVVSSNDMVSCYTNGSRNLQNSSVTANRSILENDIDSLQENLDARHSYVGIFDKSSSSKKDNKEMLSDGGLSGSISEDKTLSETPSTPSGAGSLSNFSSKTNPLKAQVPPCDIFSRKKMSNFLGNRMISPPSYISYQIRESECLLDSKHIPKEKLQGGANISNVDNPLPRLVGPRSSNGSAHVDYPYGGGQVTFDGNRNLMKGSTPSSVRTTVNGSSDGEMYPRINTNVSTTMSNDFDHVTSKSQKVGDSIGEARLALGDEDLGPIERNMCVSSTGVVRVQSRKKAEMFLVRTDGYSCTREKVTESSLAFTHPSTQQQMLMWKSTPKTVLLLKKLGEELMEEAKEVASFLYHQEKMNVVVEPEVHDIFARIPGFGYVQTFYSQDTSDLHEKVDLVACLGGDGVILHASNLFRDAVPPVVSFNLGSLGFLTSHRFEDYRQDLRQVIHGNYTRDGVYITLRMRLRCEIFRKGKAVPGKVFDILNEVVLDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRIYMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1216 1028 MobiDBLite consensus disorder prediction 467 498 - -
Glsi10g1216 1028 PANTHER NAD KINASE 330 1028 - -
Glsi10g1216 1028 FunFam NAD kinase 2, chloroplastic 855 995 - -
Glsi10g1216 1028 FunFam NAD kinase 2 chloroplastic 273 407 - -
Glsi10g1216 1028 Coils Coil 415 435 - -
Glsi10g1216 1028 Gene3D Protein tyrosine phosphatase superfamily 275 407 IPR029021 -
Glsi10g1216 1028 Gene3D - 855 995 IPR017437 GO:0003951|GO:0019674
Glsi10g1216 1028 FunFam NAD kinase 2, chloroplastic 710 873 - -
Glsi10g1216 1028 Gene3D - 710 1020 IPR017438 -
Glsi10g1216 1028 MobiDBLite consensus disorder prediction 449 498 - -
Glsi10g1216 1028 Pfam ATP-NAD kinase C-terminal domain 875 1001 - -
Glsi10g1216 1028 MobiDBLite consensus disorder prediction 593 616 - -
Glsi10g1216 1028 Pfam ATP-NAD kinase N-terminal domain 731 843 IPR002504 GO:0003951|GO:0006741
Glsi10g1216 1028 MobiDBLite consensus disorder prediction 551 578 - -
Glsi10g1216 1028 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 723 1023 IPR016064 -
Glsi10g1216 1028 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 281 385 IPR029021 -
Glsi10g1216 1028 Hamap NAD kinase [nadK]. 721 1019 IPR002504 GO:0003951|GO:0006741
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1216 Glsi-ChrGlsi10 8166501 8172300 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1216 10 8166501 8172300 Glsi08g1090 08 8043796 8049401 CCT