Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1090 ATGGTAGCATGTCTCTGCACGTGCCACATGGCATTCCCCGTCGACATGAATCTTACTCCTCCGCCGGCGACCGGAGTAATCTCACCTTCATATCTTTATTTCTTTAGGCCTCCTCACTCCTTAGGCAATAGCAGACTCTTCGGTTTTGAGTTGCAGAGGAAAGTAAAGCTACGGAGACAGCTCAAGTTCGTTATCAGTGCTGAGCTCTCCAAGTCCTTTTCCTTAAATTTCGGATTGGAATCTCAGAGCTTGAATTCTTTTCAATCCCATGATCCATCACAGTTGCCTTGGATGGGACCAGTTCCAGGCGATATTGCTGAAGTCGAGGCATATTGTAGGATCTTTAGGACTTCAGAAAGGCTTCATTCTGCATTAATGGATGCATTATGCAACCCACTGACTGGTGAATGTAGTGTCTCGTATGAGGTGCCATCTGATGAGAAACCCCAACTGGAAGATAAATTAGTCTCTGTCCTCGGATGCATGGCATCCCTTGTGAACAAAGGCAGGGAGGATGTTCTTTCTGGAAGGTCCTCAAATTTGAATCCCTTTCGTGTTGCAGAAGTTAGCACAATGGAAGATAAGCTTCCCCCGCTTGCCATTTTTAGGAGTGAGATGAAAAGGTGTTGTGAGAGCTTGCATGTAGCTCTTGAGAACTATTTGATAACAGATGATGATCGAAGCTTGAATGTATGGAGGAAACTTCAGAGACTGAAGAACGTCTGCTATGATTCTGGTTTTCCTCGCTGGGAGGATCATCCTTGCCATACACTTTTTGCAAATTGGAGTCCTGTATATTTATCCACTTCTAAAGAGGACACCAAATTTAACTCCAAGGCAGCTTTTTGGACAGGTGGTCAGGTGACGGAAGAAGGCCTGAAGTGGTTACTGGATAGAGGATATAAAACTATTATTGATCTTAGAGCCGAGACTGTCAAAGATAACTTCTATCAAGCAGCTGTGAATGATGCTATTGCGTTTGGGAGAATTGAAATGGTCAAAATCCCAGTTGAAGTCAAGACTGCACCTACAATGGAACAGGTTGTTCGGTTTGCATCTTTTGTTTCAGATTGCAGTAAAAGGCCTATCTATCTTCACAGTAAGGAAGGAGTTTGGAGAACATCTGCCATGGTCTCCCGGTGGAGGCAGTACATGACTCGCTCTGCATCACAGTTTGTTTCTAATCAATCAGTAATTTCCAATGACATGTTATCAAATTATACAAATGGATCCAAAAAACTGCAGGACTCTTCAGTTACTGCAGAGAGTTCCGCTGTGGACAAGGATATCAATTTATTACCAGAGAGTTTGGGTGTAACACATATTTCTTTTTGTACATTTGACAGAAGTACCTCTCCAAAGAATGATGACAAAAAAATGCAAAGTAATGGGACCTTAAGTGGATTAACTTCTAACGATAGCAAATTATCAGAAGCTGCTGCTAAAGGGGCAGGATCTTTTTCAAGTTTCTCCAACAAAACTAACCCTTTAAAAGCTCAGGTTCCTCCATGTGATATCTTTTCCAAAAAGGAGATGTCCAGCTTCTTGGGAAGTAGGAAGATCTCACCACCCTCTTATTTCAACTACCAGATTAAAAGATTGGAATGCTTACCAGATTCAAGGAACATGTATATTGGAAGATTTCAGGGTGGTGTGATTGTCGGCAGTGGTGATAATCCTGTACACAAAATTATGGATCCAGGAAGTTTCAATGGATCAGCTCATGTAAATCATCTATCTGGAGAGCCCCAGATTAAAGTTGGTGGCGATCCTAAGTTAGTAAATGGCAGCACTTCTGGTTATGTTAGGACAAAAATAAATGGATCTAGTGAAGGGGAAACTTATTCCACGACTAATGCTAGTGTCTCTACCGCTTTGAACAATGACCTTGATAACATTACAAATAAATCTCAAAGGGTTAGGGATGGCACGGGTGAGACTGGACTAGCCTTAGGCGACAAAGACTTGGGACCTGTTGAAGGGAATATGTGTGCATCTTCAACGGGCGTAGTAAGGTTGCAGTCAAGAAAGAAAGCAGAGATGTTCCTAGTTCGGACAGATGGATTTTCTTGTACCAGAGAAAAGGTGACTGAATCATCTTTGGCTTTCACTCACCCTAGCACCCAGCAACAGATGCTTATGTGGAAATCTTTGCCAAAGACTGTATTGTTGTTGAAAAAGCTGGGGGAGGAACTGATGGAAGAAGCTAAACAGGTTGCTTCTTTTTTATATCACCAAGAGGGAATGAACGTTCTTGTGGAACCTGATGTTCATGATATATTTGCTAGAATTCCGGGGTTTGGGTTTGTTCAGACCTTCTATAGTCATGATACCAGTGATCTACATGAGAAAGTAGATTTTGTGGCATGCTTGGGGGGAGATGGTGTTATACTGCATGCTTCAAATATATTTAGGGGTGCTGTTCCGCCAGTTGTATCATTTAACCTTGGCTCCCTTGGTTTTCTGACTTCTCATCATTTTGAAGACTTCGTGCAGGACTTAGGACAAATCATCCATGGAAATAATACACGAGATGGTGTATACATCACTCTCAGAATGCGTCTTCGATGTGAACTTTTTCGTAAGGGTAAAACAATGCCTGGGAAAGTATTTGATGTCCTTAATGAGGTTGTTGTTGATCGGGGTTCTAACCCATACCTTTCAAAGATTGAATGTTTTGAACATGATAGACTTATAACCAAGGTACAAGGAGATGGAGTCATCGTGGCCACCCCTACAGGAAGTACTGCCTATTCTACAGCTGCTGGAGGTTCCATGGTACATCCAAATGTTCCCTGCATACTATTTACCCCAATTTGTCCACATTCACTCTCATTTAGACCAGTTATACTTCCAGATTCTGCTCAACTTGAGTTAAAGATTCCAGAAGATTCAAGAAGCAGTGCATGGGTTTCATTTGATGGGAAGAGAAGGCAGCAGCTCTCTAGGGGAGATTCTGTTCAAATATCTATGAGTCAGCATCCACTCCCAACTGTTAACAAATTTGACCAAACGGGTGATTGGTTTCGCAGCTTAATTCGCTGCCTGAATTGGAATGAAAGGCTTGATCAAAAGGCTTTATAA 3084 0.4212 MVACLCTCHMAFPVDMNLTPPPATGVISPSYLYFFRPPHSLGNSRLFGFELQRKVKLRRQLKFVISAELSKSFSLNFGLESQSLNSFQSHDPSQLPWMGPVPGDIAEVEAYCRIFRTSERLHSALMDALCNPLTGECSVSYEVPSDEKPQLEDKLVSVLGCMASLVNKGREDVLSGRSSNLNPFRVAEVSTMEDKLPPLAIFRSEMKRCCESLHVALENYLITDDDRSLNVWRKLQRLKNVCYDSGFPRWEDHPCHTLFANWSPVYLSTSKEDTKFNSKAAFWTGGQVTEEGLKWLLDRGYKTIIDLRAETVKDNFYQAAVNDAIAFGRIEMVKIPVEVKTAPTMEQVVRFASFVSDCSKRPIYLHSKEGVWRTSAMVSRWRQYMTRSASQFVSNQSVISNDMLSNYTNGSKKLQDSSVTAESSAVDKDINLLPESLGVTHISFCTFDRSTSPKNDDKKMQSNGTLSGLTSNDSKLSEAAAKGAGSFSSFSNKTNPLKAQVPPCDIFSKKEMSSFLGSRKISPPSYFNYQIKRLECLPDSRNMYIGRFQGGVIVGSGDNPVHKIMDPGSFNGSAHVNHLSGEPQIKVGGDPKLVNGSTSGYVRTKINGSSEGETYSTTNASVSTALNNDLDNITNKSQRVRDGTGETGLALGDKDLGPVEGNMCASSTGVVRLQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSLPKTVLLLKKLGEELMEEAKQVASFLYHQEGMNVLVEPDVHDIFARIPGFGFVQTFYSHDTSDLHEKVDFVACLGGDGVILHASNIFRGAVPPVVSFNLGSLGFLTSHHFEDFVQDLGQIIHGNNTRDGVYITLRMRLRCELFRKGKTMPGKVFDVLNEVVVDRGSNPYLSKIECFEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCILFTPICPHSLSFRPVILPDSAQLELKIPEDSRSSAWVSFDGKRRQQLSRGDSVQISMSQHPLPTVNKFDQTGDWFRSLIRCLNWNERLDQKAL 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1090 1027 Hamap NAD kinase [nadK]. 720 1018 IPR002504 GO:0003951|GO:0006741
Glsi08g1090 1027 MobiDBLite consensus disorder prediction 451 472 - -
Glsi08g1090 1027 MobiDBLite consensus disorder prediction 457 472 - -
Glsi08g1090 1027 Pfam ATP-NAD kinase N-terminal domain 773 840 IPR002504 GO:0003951|GO:0006741
Glsi08g1090 1027 FunFam NAD kinase 2, chloroplastic 854 994 - -
Glsi08g1090 1027 Pfam ATP-NAD kinase C-terminal domain 874 1000 - -
Glsi08g1090 1027 Gene3D Protein tyrosine phosphatase superfamily 277 411 IPR029021 -
Glsi08g1090 1027 PANTHER NAD KINASE 278 1027 - -
Glsi08g1090 1027 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 282 391 IPR029021 -
Glsi08g1090 1027 FunFam NAD kinase 2, chloroplastic 709 875 - -
Glsi08g1090 1027 Gene3D - 854 994 IPR017437 GO:0003951|GO:0019674
Glsi08g1090 1027 FunFam NAD kinase 2 chloroplastic 274 408 - -
Glsi08g1090 1027 Gene3D - 709 1019 IPR017438 -
Glsi08g1090 1027 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 722 1022 IPR016064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1090 Glsi-ChrGlsi08 8043796 8049401 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1216 10 8166501 8172300 Glsi08g1090 08 8043796 8049401 CCT