Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1115 ATGGTGACAAAAAGTAGCCCCCCGGAGCCAGCAAGCATCGAGCAGCTTGGTGGGTTGTCAAGATGCGAGACATCTGCTGCATGCCATCTGAAACCCAATGTTATGGAAGCAGACTCTGATCCAAGCACTGTTAAAGAGCATCTTCGGCTTGCTAAGACGAAAAGCGGAGATCCTGTTTTTGTTCGTCAAGAGTGTGCTTTTGGTTATCTTTTGATGCTCCACATACAAACTCTTGCTCGCTTTCACCATGGAAAAGAGTTGATGGAGGCACATGGAGTAAATTCTCAAGCTGCTGAAAATCAGGAAGTAGATGATTTCACCATGCTGAATGAAGATCTTGGTAAACCATTGGATGAGGTGGAAACTCAAAAAATTGGCCGTGATGGTTCCCCTGAGTTATACAATGGACAAGATGATATACCTTTCAAGAAAATTGAGATAACAGACGTAAAGTCTAACATTCATGAGGGGATGGCAGACAATGCAGGTGGAGAATCTGATTTGGCTCAGATGATTGATGAGAGTAAGGATTTGCAGTGTGCATCTCTACAAGAAAACTCAGAAACCTGTACTGCACTGGTTGGCTCTTGTCACAAAGTGCGTAAGAGTACTGTCATGAAATCTGAAACTCATAATGAATATGTCAATATTGTTAGACAAGAATACTCTTTTGACAAGGTAGATGGGAGTGGAGATTTTGATTCCAATAGCCAAGAAGGAAATGTAGACAAGATTTTTGGGCAGAATGACTTGGCTAAAGAGACGAAAGCGAATAGGAACCTGGAAACAGCACAAATGAATCAAAAGGAAGATGAAATACCAAGTGAGGACAGTAATTTGGAGCCTGTATTTGATGGAATGGAGGTTCCTGGTATGGAAGTTGGCAGTAACACATTTACGCATTCTTTGGAAGCTGATCGGGCAACTAATGGTGTAGTTGAGAAGGCAATGACAATTAAAAATATTTTTAGGCAGAAAAGTTCAGCAGCAGTCTCCACTTTTCTGCGTCACCTTTCTGGAAAAATTGATGGAGATGCTGTGTGCATGTTTGATGATGAAGGTAAGGAAATTCCAGGTTCCTCAAAAGACAGTGAATCCAAAGAGGTTTTCGAGAAAGAAGTGGAGAGACTTGCTTTGAATCCCCTAAATTATATTAAGATGTCATCTGATGTTGATGTGGAGAACAAAACTGAACAGAGGGAATTGATGACTAAGGGGCCACCTCAACCCTTGGTTATGAAAGGAAGGGTTATACTGTACACAAGGCTAAGGTGCCAAGAATGTAAAGAGGCTAGGCTATTTTTGTACATGAAAAGGCTCAGATATGTTGAAATCAACATTGATGTGTACCCTAGTAGAAAGCTGGAGCTGGAGAAGATTTCTGGGTCTACTTCTGTTCCAAAGGTGTTTTTCAATGAAATACTTATTGGAGGCTTGAGTGAGCTAAAGGCCTTGAATGAATCTGGGAAGCTTGATGAGAAGATTGACTTTCTCATCATTGAAGCACCATCATTTGAGGCGTCCTTACCACCTCTTTCTGGAGAGGATGATGTGTCTACTAGTGGAGCTGTCGATGAAATGGCTTTAATTGTCCGCAAAATGAAAGAATCTATTGTAGTTAAGGACCGATTTTGGAGAATGCGCAGGTTCACAAACTGTTTTGTTGGCTCAGAAGCTGTGGACTTTTTATCAGAAGATCAATATTTGGAAAGGCCAGAGGCTGTTGATTTTGCACGAAAACTTGCAAGCAAACTCTTCTTTCAACATGTTCTTGATGAGAATACATTTGAGGATGGTAATCACTTGTATCGCTTTTTGGATGATGATCCAATTGTGACGACTCAGTGTCACAACATTCCGCGGGGCATTATTACTAGGAAGCCCAAGCCTATAGCAGAAATTGCATCAAGGCTGAGGTTTCTGTCCTATGCAATATTTGAAGCCTATACTTCTGAAGATGGACTTCATGTTGATTACAGAAGTCTCCATGGAAGTGAGGAGTTTGCAAGATACCTGAGAATAGTCGAGGAGCTCCAACGAGTGGAAGTATGGGAAATGTCTAGAGAGGAGAAGCTTGCTTTCTTTATTAATCTTTATAATATGATGGCCATCCATGCAATCTTAGTATGGGGTCATCCAGATGGAGCACTGGATAGAAGGAAATTGTTTGGAGATTTCAAATATGTCATCGGTGGGTGCACCTACTCACTTTCATCTATTCAAAATGGCATTTTGAGGGGAAACCAGAGACCGCCTTATAACCTTATGAAGCCATTTGGTGCAAACGATAAACGTTCAAGGGTGGCTCTCCATTATGCCGAGCCTCTTATTCATTTTGCTTTAGTTTGTGGTACCCGATCTGGCCCTAAGCTTCGATGCTATTCTCCTGGAGACATTGACGAAGAATTAACGGATGCAGGCCGTAATTTCTTAAGAAGTGGAGGGCTTACAATTGATTTGAATGCAAAGGTTGCATATGCTAGTAAGATCCTTAAGTGGTTTAGTATAGATTTTGGCAATAACGAGGTGGAGGTACTGAAGCATGTGTCCAACTACTTAGATTTAGCCGACTCAACAGTCTTACTAGACCTGCTTGCCACTTCTGGGTTGAAGGTGATTTATCAGCCATACGATTGGGGTTTGAACTGCTAG 2652 0.4159 MVTKSSPPEPASIEQLGGLSRCETSAACHLKPNVMEADSDPSTVKEHLRLAKTKSGDPVFVRQECAFGYLLMLHIQTLARFHHGKELMEAHGVNSQAAENQEVDDFTMLNEDLGKPLDEVETQKIGRDGSPELYNGQDDIPFKKIEITDVKSNIHEGMADNAGGESDLAQMIDESKDLQCASLQENSETCTALVGSCHKVRKSTVMKSETHNEYVNIVRQEYSFDKVDGSGDFDSNSQEGNVDKIFGQNDLAKETKANRNLETAQMNQKEDEIPSEDSNLEPVFDGMEVPGMEVGSNTFTHSLEADRATNGVVEKAMTIKNIFRQKSSAAVSTFLRHLSGKIDGDAVCMFDDEGKEIPGSSKDSESKEVFEKEVERLALNPLNYIKMSSDVDVENKTEQRELMTKGPPQPLVMKGRVILYTRLRCQECKEARLFLYMKRLRYVEINIDVYPSRKLELEKISGSTSVPKVFFNEILIGGLSELKALNESGKLDEKIDFLIIEAPSFEASLPPLSGEDDVSTSGAVDEMALIVRKMKESIVVKDRFWRMRRFTNCFVGSEAVDFLSEDQYLERPEAVDFARKLASKLFFQHVLDENTFEDGNHLYRFLDDDPIVTTQCHNIPRGIITRKPKPIAEIASRLRFLSYAIFEAYTSEDGLHVDYRSLHGSEEFARYLRIVEELQRVEVWEMSREEKLAFFINLYNMMAIHAILVWGHPDGALDRRKLFGDFKYVIGGCTYSLSSIQNGILRGNQRPPYNLMKPFGANDKRSRVALHYAEPLIHFALVCGTRSGPKLRCYSPGDIDEELTDAGRNFLRSGGLTIDLNAKVAYASKILKWFSIDFGNNEVEVLKHVSNYLDLADSTVLLDLLATSGLKVIYQPYDWGLNC 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1115 883 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 204 883 - -
Glsi10g1115 883 SUPERFAMILY "Winged helix" DNA-binding domain 527 615 IPR036390 -
Glsi10g1115 883 Pfam Protein of unknown function, DUF547 685 811 IPR006869 -
Glsi10g1115 883 CDD DEP 530 604 - -
Glsi10g1115 883 ProSiteProfiles DEP domain profile. 534 607 IPR000591 GO:0035556
Glsi10g1115 883 MobiDBLite consensus disorder prediction 259 279 - -
Glsi10g1115 883 Coils Coil 252 272 - -
Glsi10g1115 883 SMART DEP_3 534 607 IPR000591 GO:0035556
Glsi10g1115 883 Gene3D - 518 611 IPR036388 -
Glsi10g1115 883 SUPERFAMILY Thioredoxin-like 409 496 IPR036249 -
Glsi10g1115 883 ProSiteProfiles Glutaredoxin domain profile. 405 502 - -
Glsi10g1115 883 Pfam Glutaredoxin 417 473 IPR002109 -
Glsi10g1115 883 Gene3D Glutaredoxin 413 497 - -
Glsi10g1115 883 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 538 605 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1115 Glsi-ChrGlsi10 7479697 7488937 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1115 10 7479697 7488937 Glsi08g1215 08 8815873 8819991 CCT
Glsi10g1115 10 7479697 7488937 Glsi10g1115 10 7479697 7488937 ECH