Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1215 ATGGAAAAGAAAGAGTTAGTGGAGAAAATTGAATCAAATTCTCAAGCTGTTGAAACGCTTGAAGGAGATGCTTCCACTGTTCAGAATGAAAATCCGGGTAAACCATTGGAAGAGGTAAAATTTCAAAATATTGGCCATGAATGTTCTGAGTTAGACAATAGACAAGATGATATGTCTGGCAAGATAAATGAGATGGCAGAGGTGCATGAGAGTAATGTCATGAAATCTGAAACTCTAGATGAATTCGTCAATGATGTTGGACAAGAATGCTCCAGTGACATTGTTGATAGCAATAGAGATTTTGATCTTACAACTCAAGAAGGAATTGTGGATAAAAATTCTGGACACATTGACCTGGCTGAAGAGATGAACGAGAGTAGGAACATGGAATCGACACTAATGAATCAAAAGACAGACGAAATTCCAAGTGATGAAAATAATTTGGAGCCTGTGTTTGATGGAACAGAGGTTCCAGGGATGGAAGCTAGCAGAAGCACATATGATCGTTCTTTGGATGCTAATCCAGATACTCAGGGCATGGTTGAGAAGGCACTGGCACTCAAAAATTTTGTTAGGCAGAAGAGTGCAGTAGCAGTCTCCACTGTGATGCGTCGCCTTTCTGGAAAAAGTGATGAAGGTACCATGAGCAATTCTGATGATGAAGGTAAGAATGTCACAGATTCCTCAAAAGACAGTGAATCCAAAGAAGTTCTTGAGAAAAAATTTGCTTGGAATCCCCTAAACTATATTAGGATGTCATCTGATGTTGATTTGGAAAATAAAAATGAACAAAGGGAACCGGTAACTGAACAGCCATCACATCCCGTAGCCATGAAAGGAAGGATTTTACTCTACACAAGACTAGGGTGCCAAGAATCTAAAGAGGTTAGGCTATATTTGTATATGAAACAGCTTAGATATGTTGAAATCAACATTGATGTGTACCCCAGTCGAAAACTGGAGCTAGAGAAAATTTCTGGATCTACTTCTGTTCCCAAGGTATTTTTCAATGAAATACTTATTGGAGGTCTGAATGAGCTAAAGGCCTTGAATGAGTCTGGCAAGCTTGATGAGAAGATCGAATTTCTCATTAATGAAGAACCGTCACTTGAAGCCCCATTACCTCCACTTTCTGGAGAGGATGATGAGTCTAGTAGTGGTGCTCTGGATGAAATGGCTCTAATTGTCAGCAAAATGAAAGAGTTTATTGTTGTGAAGGACCGATTTTACAAAATGCGCAGGTTCACTAAATGTTTTGTTGGCTCAGAAGCTGTGGACTTCTTATCAGAAGATCAATATTTGGAAAGGCAGGAGGCTGTTGAGTTTGCACGAAATCTTGCTAGCAAATTCTTCTTTCAACACGTTATTGATGAGAATGTATTTGAGGATGGTAATCACTTGTATCGGTTTCTGGATGATGATCCAATTGTGGCATCTCAATGTTACAATATTCCAAGGGGCATAACCACTGTGAAGCCCAAGCCTATAGGAGAAATTGCATCAAGGCTGAGGTTTCTGTCTTATGCAATATTTGAAGTCTATGCCTCTGAAGATGGACGTCATTTTGATTACAGAAGTCTACATGGAAGTGAGGAGTTTGCAAGGTATCTGAGAATAGTCGAGGAGCTCCAAAGAGTGGAAATATGGGATATGTCTAGAGAAGAGAAGATTGCTTTCTTTATTAATCTTTATAATATGATGGCCATCCATGCAATCTCAGTATGGGGTCATCCAGCTGGAGCACTGGAAAGAAGGAAATTGTTTGGAGACTTCAAATATGTGATTGGCGGGTCCACTTACTCACTTTCAGCTATTCAAAATGGCATTTTGAGGGGAAACCAGCGACCGCCATATAATCTTATGAAGCCATTTGGTGCAAAAGATAGACGTTCAAGGGTGGCTCTCCCTTACCCCGAACCTCTTGTTCATTTTGCTCTAGTATGTGGCGCCAGATCTGGACCTGCACTTCGATGCTTTTCTCCTGGGGACATTGACAAGGAATTAATGGATGCAGCCCGCAATTTCTTAAAAAGTGGAGGACTTGTCGTTGATTTGAATACAAAGGTTGCATATGCTAGTAAGCTCCTTAAGTGGTTTAGCGTAGATTTTGGAAAGAACGAGGGAGAGGTACTGAAGCATGTGTCAAACTACTTAGATTCAGCTGACTCAGCAGTGTTATTGGACCTGCTTGCGACTTCAGAGTTGAAGGTGATATATCAGCCGTATGACTGGAGTTTGAACTGCTAG 2247 0.4054 MEKKELVEKIESNSQAVETLEGDASTVQNENPGKPLEEVKFQNIGHECSELDNRQDDMSGKINEMAEVHESNVMKSETLDEFVNDVGQECSSDIVDSNRDFDLTTQEGIVDKNSGHIDLAEEMNESRNMESTLMNQKTDEIPSDENNLEPVFDGTEVPGMEASRSTYDRSLDANPDTQGMVEKALALKNFVRQKSAVAVSTVMRRLSGKSDEGTMSNSDDEGKNVTDSSKDSESKEVLEKKFAWNPLNYIRMSSDVDLENKNEQREPVTEQPSHPVAMKGRILLYTRLGCQESKEVRLYLYMKQLRYVEINIDVYPSRKLELEKISGSTSVPKVFFNEILIGGLNELKALNESGKLDEKIEFLINEEPSLEAPLPPLSGEDDESSSGALDEMALIVSKMKEFIVVKDRFYKMRRFTKCFVGSEAVDFLSEDQYLERQEAVEFARNLASKFFFQHVIDENVFEDGNHLYRFLDDDPIVASQCYNIPRGITTVKPKPIGEIASRLRFLSYAIFEVYASEDGRHFDYRSLHGSEEFARYLRIVEELQRVEIWDMSREEKIAFFINLYNMMAIHAISVWGHPAGALERRKLFGDFKYVIGGSTYSLSAIQNGILRGNQRPPYNLMKPFGAKDRRSRVALPYPEPLVHFALVCGARSGPALRCFSPGDIDKELMDAARNFLKSGGLVVDLNTKVAYASKLLKWFSVDFGKNEGEVLKHVSNYLDSADSAVLLDLLATSELKVIYQPYDWSLNC 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1215 748 SMART DEP_3 399 472 IPR000591 GO:0035556
Glsi08g1215 748 ProSiteProfiles Glutaredoxin domain profile. 270 367 - -
Glsi08g1215 748 MobiDBLite consensus disorder prediction 12 32 - -
Glsi08g1215 748 MobiDBLite consensus disorder prediction 1 34 - -
Glsi08g1215 748 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 404 470 IPR000591 GO:0035556
Glsi08g1215 748 Pfam Glutaredoxin 282 338 IPR002109 -
Glsi08g1215 748 CDD DEP 395 469 - -
Glsi08g1215 748 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 10 748 - -
Glsi08g1215 748 MobiDBLite consensus disorder prediction 140 159 - -
Glsi08g1215 748 Pfam Protein of unknown function, DUF547 550 676 IPR006869 -
Glsi08g1215 748 Coils Coil 3 23 - -
Glsi08g1215 748 Gene3D - 388 477 IPR036388 -
Glsi08g1215 748 Gene3D Glutaredoxin 277 362 - -
Glsi08g1215 748 SUPERFAMILY "Winged helix" DNA-binding domain 400 480 IPR036390 -
Glsi08g1215 748 MobiDBLite consensus disorder prediction 214 237 - -
Glsi08g1215 748 MobiDBLite consensus disorder prediction 208 237 - -
Glsi08g1215 748 SUPERFAMILY Thioredoxin-like 279 361 IPR036249 -
Glsi08g1215 748 ProSiteProfiles DEP domain profile. 399 472 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1215 Glsi-ChrGlsi08 8815873 8819991 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1115 10 7479697 7488937 Glsi08g1215 08 8815873 8819991 CCT
Glsi08g1215 08 8815873 8819991 Glsi08g1215 08 8815873 8819991 ECH