Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1081 ATGGCAGAGAGGGCTAAGAACAAGGTGGAGAATGACCAGGGTTGTGGTTTTATGGGGAGGATTTTCCTTCTCAAAATCTATAGGCCGAGAAAATCATCTGTTCATTCACTACCCATGAAAGCTAGCAACAATGTACAAAGCGATCGGAGAAAAAATGAATCCAAGGGTCTTGGAAATATCTCCACCGAGACTGTGCCCAATGAATCCCACAAACCACCCAGAAAGAGCACCTCTGGATTCCGGAACAATCAAAATCGGTGGCCTTCAGATGCTGCGAGAAGTTCAACATCATCATCCTCTGGTAATTCAAGCCATACAAAGGTTCAACAGAACCAGGACATGAATGATGAGAACAGGCTACAGAGAGAGCCCATCGGCAGCTCTCTGGAGGTTGCTAGGATAAGTACTAGTCACCCGCGAGACTACAGGAACAAAGCCCCTGCGAAACTTACTGGGAATTTGCTTGCAAGTAACAGCCCAAGAACTAGCATCAAGAGAATTGAATACGTTCCTAAGAGTAAAGAGTTGAATTCTCTGCCCAATTCTCACAGTAACGCCGTGATGGGGAACATCATGAGGAAGAATAGCGATGAGCTTGCGCAATTCCGGAGCCCAAGGAACAGAGTAGACCCTGAGGTGTTGAAATCCATGGGAAATGAAGCATACAAGCAGGAAAAATTTGAAGAGGCTTTGGCTTTGTATAACCGAGCCATTCATCTTGATGCAAGTAAGGCAACCTATCATTGCAATAAGAGCGCAGCTTTAATGAGCTTAGGTCGGCTTCTTGAAGCAATGGTTGAATGCGAAGAAGCTATCAGGCTGGAACCTTCTTATAACAGAGCTCACCACCGTTTGGCAACAATATATCTCAGATTGGGAGAAGCAGAAAAAGCGATGAAATGCTATAGCACAACCCCATATGGTGATTCCGTGCTCGCTTTCCAAGCTCAGGCTCTCCAAAATCACCTTAATAAATGCATTGAAGCTCGGAAATTGAATGAATGGAACGTTATACTAAAGGAAACACAGTCTGCAATATCATTAGGTGCTGATTCAGCTCCACAGGTGTATGCCCTGCAAACAGAAGCCCTTCTGAAGCTTCAGAGACATCAAGAGGCATATTCTACCTATGAAAAGATGCCCAAATTTGAGCTTGATTGGTGTACTAAGCTTTTTGGCCTGCCTCGTACTGCTTACTTGTGGATGATAATCGCCCAGGTTCACTTGGCAGCCGGCAGGTTCGAGGATGCTGTAACAGCTGCTCAGCAAGCAGCTGAACTCGATCCGAGCAACAACGAGGTGAATGTAGTGGTAAGGAGGACCAGGGCAGTGACATCAGCCAGACTGAGGGGTAATTTACTCTTCAAGGCATCAAAATTCACGGAAGCATGTGCCGTATACAACGAAGGACTAGATCATGATCCATGCACCTCAGTTCTGCTATGCAACAGAGCAGCGTGTCGTTCCAAGCTAGGCCAATTCGAGAAAGCAATTGAAGATTGTAATGCAGCCCTTACAATTCAGCCTTATTACAGCAAGGCGAGGTTACGGAGGGCAGATTGCAATGCCAAGTTGGAAAGATGGGAAGCTGCCATTCAAGACTACGAAATGCTGATAAGAGAAAAGCCAGGGGATGAGGAGGTAGCCAGGGCTTTGTTTGAGGCTCAACTTCAACTCAAGACGCTGCGTGGGGAAGATATTAAAGACTTAAAATTTGGTTCAAATTTGGTTTTCATCTCAAGCAATGATCGGTTTAGACATTATGTAACCTCACCTGGAATGTCTGTGGTGCTCTTTTGCAACAAGGCAACCCACAAGCAAGTATTGCTGGTATTGGAGCAAACCTGCAAGAGATTTCCATCCGTTAATTTCCTCAAGGTGGAGATTGAAGACCATCCTTACTTAGCGAAATCAGAAGGCGTGGACACTATCCCAGCCTTCAGAATATACAAGAACGGATCAAGGGTCAAAGAAATTCCAGGAAACAAACACGAGTTGTTAGAAAGATCAGTTAAATTGTATACTAGCTGA 2031 0.451 MAERAKNKVENDQGCGFMGRIFLLKIYRPRKSSVHSLPMKASNNVQSDRRKNESKGLGNISTETVPNESHKPPRKSTSGFRNNQNRWPSDAARSSTSSSSGNSSHTKVQQNQDMNDENRLQREPIGSSLEVARISTSHPRDYRNKAPAKLTGNLLASNSPRTSIKRIEYVPKSKELNSLPNSHSNAVMGNIMRKNSDELAQFRSPRNRVDPEVLKSMGNEAYKQEKFEEALALYNRAIHLDASKATYHCNKSAALMSLGRLLEAMVECEEAIRLEPSYNRAHHRLATIYLRLGEAEKAMKCYSTTPYGDSVLAFQAQALQNHLNKCIEARKLNEWNVILKETQSAISLGADSAPQVYALQTEALLKLQRHQEAYSTYEKMPKFELDWCTKLFGLPRTAYLWMIIAQVHLAAGRFEDAVTAAQQAAELDPSNNEVNVVVRRTRAVTSARLRGNLLFKASKFTEACAVYNEGLDHDPCTSVLLCNRAACRSKLGQFEKAIEDCNAALTIQPYYSKARLRRADCNAKLERWEAAIQDYEMLIREKPGDEEVARALFEAQLQLKTLRGEDIKDLKFGSNLVFISSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVDTIPAFRIYKNGSRVKEIPGNKHELLERSVKLYTS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1081 676 MobiDBLite consensus disorder prediction 57 115 - -
Glsi10g1081 676 Pfam Tetratricopeptide repeat 280 302 IPR019734 GO:0005515
Glsi10g1081 676 SUPERFAMILY TPR-like 211 433 IPR011990 GO:0005515
Glsi10g1081 676 Gene3D Glutaredoxin 571 675 - -
Glsi10g1081 676 Gene3D Tetratricopeptide repeat domain 209 563 IPR011990 GO:0005515
Glsi10g1081 676 Pfam Tetratricopeptide repeat 405 475 - -
Glsi10g1081 676 Pfam Tetratricopeptide repeat 480 510 IPR001440 GO:0005515
Glsi10g1081 676 Pfam TPR repeat 218 259 - -
Glsi10g1081 676 Coils Coil 518 538 - -
Glsi10g1081 676 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 6 672 IPR044534 -
Glsi10g1081 676 SUPERFAMILY Thioredoxin-like 559 666 IPR036249 -
Glsi10g1081 676 Pfam Thioredoxin 606 667 IPR013766 -
Glsi10g1081 676 Pfam Tetratricopeptide repeat 514 543 IPR019734 GO:0005515
Glsi10g1081 676 ProSiteProfiles TPR repeat profile. 211 244 IPR019734 GO:0005515
Glsi10g1081 676 SMART tpr_5 398 431 IPR019734 GO:0005515
Glsi10g1081 676 SMART tpr_5 211 244 IPR019734 GO:0005515
Glsi10g1081 676 SMART tpr_5 478 511 IPR019734 GO:0005515
Glsi10g1081 676 SMART tpr_5 279 318 IPR019734 GO:0005515
Glsi10g1081 676 SMART tpr_5 245 278 IPR019734 GO:0005515
Glsi10g1081 676 SMART tpr_5 444 477 IPR019734 GO:0005515
Glsi10g1081 676 SMART tpr_5 512 545 IPR019734 GO:0005515
Glsi10g1081 676 ProSiteProfiles TPR repeat profile. 398 431 IPR019734 GO:0005515
Glsi10g1081 676 SUPERFAMILY TPR-like 448 560 IPR011990 GO:0005515
Glsi10g1081 676 MobiDBLite consensus disorder prediction 33 146 - -
Glsi10g1081 676 CDD TRX_family 585 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1081 Glsi-ChrGlsi10 7248383 7250988 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1081 10 7248383 7250988 Glsi08g1244 08 9069473 9078239 CCT