Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0786 ATGCTACTCATCGTTTTCGAGAAAGATATGAACGATGTGGTCATGTCTGTTGATGAAACAATAGCTGTTAGAACGTCGAAGGTCCTTCGAAGGAAGCTAATGCCTAAGCTGCTTGAAGATATATTGAACAGGTTCTTTATTCTTTCTCAGGAAATAAAAGAGATGGCTGATGACAAAGGAGTTGGGGAAGGTAAAGAGACAAGTCCTACTGCCACTGGGAATGGAAAGAAGAAGCGCAAGGGATTTATTTCCCGACTTTGGAATGGAATATTTAGATTACATGGAGATGATTTTGAGAAGAGACTGCAATGCATTTCTAAAGAAGAAGCTGCTGTTTTGACTAGAATGAGCAGGAGATCCCAATCTTGGAGGCGGACAACCCGGCATCTCATTATATTTTCGGTTATACTTGAGGTCATTGCTATAGGTTATGCTATTATGACCACAAGATCAATAAATATGAATTGGAAGATGAGGGCATTCCGGGTTTTACCTATGTTTCTTTTGCCTGCCTTATCATCTGCTGCTTATTCGGCAGTTGTCAGCTTCACAAGGATGTGTGATCGCAGGGACCAAAAAATTCTTGAAAGGCTTCGAGCTGAAAGGCAAGCAAAAATTGATGAGCTCAAAGAGAAGACAAATTATTACTCTACTCAACAGCTCATTCAGAGATATGACCCAGATCCTGCAGCAAAGGCGGCAGCTGCAAGTGTTTTGGCTTCTAAATTGGGTGCAGATTCGGGCTTGAAAGTGTATGTGGGGGATGAATCAAAGCTTGGTGCTTCAACAGGGAAGAGCAATGATGTTGAACTTGTGCAATCTAGTGGACTTCGAAATCGCAAACAAGTGCAGTCTAGATCTACTAGTCCAGGGACAGTTACACCACAGCATTCTGATCAACAACTAGCTGGAGTTGGGGAAACTGATGAAACTCAGACTTCTGAGGATAACCAGCTTGTAGTTGTCGAGCACCACCAACCTCAAAGTTCAACCACAAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTTGTGGGTGAGGACCCAACGCAGTCTTATGCGCTCATATGTGGTAACTGCCACATGCACAATGGTCTTGCTCGGAAGGAGGATTTCCCATATATCACATACTATTGCCCGCACTGCCACGCCCTGAACAAGCCGAGGCAATCAAATGAGGTTGGCGTCTCTGGTTCGAGTTCCCCAAACGCGGGGTTTCGAACAACAGACGTTGTTGGGGCTGGGGCAGTAAAAAATGTTATTGCTTCTGCTGGTGACAGCTTAGTCACGAGTAATAATCCCGTAAATGCTAGCCCCGAGATTGAGGAAGTATCTGAAAGGGCAAGTTTGGAGGAGAAAGCTAGTTAA 1371 0.4427 MLLIVFEKDMNDVVMSVDETIAVRTSKVLRRKLMPKLLEDILNRFFILSQEIKEMADDKGVGEGKETSPTATGNGKKKRKGFISRLWNGIFRLHGDDFEKRLQCISKEEAAVLTRMSRRSQSWRRTTRHLIIFSVILEVIAIGYAIMTTRSINMNWKMRAFRVLPMFLLPALSSAAYSAVVSFTRMCDRRDQKILERLRAERQAKIDELKEKTNYYSTQQLIQRYDPDPAAKAAAASVLASKLGADSGLKVYVGDESKLGASTGKSNDVELVQSSGLRNRKQVQSRSTSPGTVTPQHSDQQLAGVGETDETQTSEDNQLVVVEHHQPQSSTTNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPYITYYCPHCHALNKPRQSNEVGVSGSSSPNAGFRTTDVVGAGAVKNVIASAGDSLVTSNNPVNASPEIEEVSERASLEEKAS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0786 456 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 76 434 IPR040115 GO:0071786
Glsi10g0786 456 MobiDBLite consensus disorder prediction 273 315 - -
Glsi10g0786 456 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 337 387 IPR019273 -
Glsi10g0786 456 Coils Coil 192 215 - -
Glsi10g0786 456 MobiDBLite consensus disorder prediction 58 77 - -
Glsi10g0786 456 MobiDBLite consensus disorder prediction 429 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0786 Glsi-ChrGlsi10 5043806 5048785 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0786 10 5043806 5048785 Glsi08g1517 08 10986258 10989519 CCT