Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1517 ATGGGTTCATTGACTTTTGACGCAGATAATAGGCGATTGCTCTTGCTTCTTAGAGAAGTTAAACCAGTGAGGAAGAGAGTTGAACTTGTGGATATACACAGCTCGAGTACATTGACGTATTGGGAAATAAAAGAGATGGCTGATGACAAAGGAGTTGAGGAAGGTGAAAAGAAAGAGACGAGTCCTACAACCACAGGAAATGGAAAGAAGCGCAAGGGAATTATTTCCCGAATTTGGAATGGAATATTAAGATTACGTGGCGATGATTTTGAGAAGAGACTACAATACATTTCTAAAGAAGAAGCTGCTGTTCTAGTTAGAATGAACAGGAGATCCCGATCTTCGAGGCAAACAACCCGACATATTATTATATTTTCTGTTATATTTGAGGTCATTGCTGTAGGTTATGCTATAATGACAACAAGATCAAAGGATATAAATTGGAAGATGAGGGTAATCCGGGTATTGCCAATGTTTCTTTTGCCTGCCTTATCATCTGCTGTTTATTCAACATTTGTCAGCTTCACAAGGATGTTTGATCGCAGGGACCAGAAAATTTTAGAAAGGCTTCGAGCTGAGAGGCAAGCAAAAATTGATGAACTCAAAGAGAAGACAAATTATTACACTACACACCAGCTCATTCAGAGATATGACCCAGATCCAGCAGCAAAGGCAGCGGCTGCAACTGTTTTGGCATCTAAGTTGGGTGCAGATTTGGGCGTGAATGTGTATGTTGGGGATGAATCTAAGCTTAGTGGTCCAACAAGGAAGAGCAATGATGTTGAACTTGTTCAATCCAGTGCACTTCGAAGTCGCAAACCAGTGCTTTCAAGATCCCCTAGTCCCGGAACAACTACCAGACCTAAACATTCTGATCAACAATTTGTTGGTTCTGGGGAAGTTGATCAAACTCAGACTTCTGAGCATAATCAGTTTGTAGTTGTTGAACATCAACCTCAAAGTTCAACAACACATGATGGGTGGTGGATTGCTCGTTTTGCGGCTTTGCTTGTGGGCGATGATCCAATGCGGTCTTACGCTCTCATATGTGGTAACTGTCATAGGCACAATGGTCTTGCTCAGAAGGAGGATTTCCCATATATCACTTACTATTGCCGGCACTGTCACGCCCTGAACAAACCAAAGCAATTGGATGGGCGCATCACGAATTTTAATTCTCAAAATATGGGGTCTCCAAAAACAGGCGTTGGGGAGTCGGTTCAAAATGCTAGCGCTTCTGCAGGTGACAGCGTAATTACAAGCAATAGTCCTTCAAGCGCTAGCCCTGAGATGGAAGAAGTATCCGAAATGGGAAGTTTGGGGGAAAATCTAGTTGGAAGGTAG 1344 0.4249 MGSLTFDADNRRLLLLLREVKPVRKRVELVDIHSSSTLTYWEIKEMADDKGVEEGEKKETSPTTTGNGKKRKGIISRIWNGILRLRGDDFEKRLQYISKEEAAVLVRMNRRSRSSRQTTRHIIIFSVIFEVIAVGYAIMTTRSKDINWKMRVIRVLPMFLLPALSSAVYSTFVSFTRMFDRRDQKILERLRAERQAKIDELKEKTNYYTTHQLIQRYDPDPAAKAAAATVLASKLGADLGVNVYVGDESKLSGPTRKSNDVELVQSSALRSRKPVLSRSPSPGTTTRPKHSDQQFVGSGEVDQTQTSEHNQFVVVEHQPQSSTTHDGWWIARFAALLVGDDPMRSYALICGNCHRHNGLAQKEDFPYITYYCRHCHALNKPKQLDGRITNFNSQNMGSPKTGVGESVQNASASAGDSVITSNSPSSASPEMEEVSEMGSLGENLVGR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1517 447 MobiDBLite consensus disorder prediction 392 447 - -
Glsi08g1517 447 MobiDBLite consensus disorder prediction 269 303 - -
Glsi08g1517 447 MobiDBLite consensus disorder prediction 392 432 - -
Glsi08g1517 447 MobiDBLite consensus disorder prediction 51 65 - -
Glsi08g1517 447 MobiDBLite consensus disorder prediction 51 70 - -
Glsi08g1517 447 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 69 428 IPR040115 GO:0071786
Glsi08g1517 447 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 329 379 IPR019273 -
Glsi08g1517 447 Coils Coil 184 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1517 Glsi-ChrGlsi08 10986258 10989519 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0786 10 5043806 5048785 Glsi08g1517 08 10986258 10989519 CCT