Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0777 ATGCTCATTAAACATCGTAGGTTTGATTTGTCTCTTAATCCCGATTTCTGGTTCTCTAGGTATACTGTTGAACAGTCTATAGAGTTCATGGAAGGTGAAAAATTTAGCAGGCTTGTTGCTCCCTTGTTCTTCATTGCCCTGTTAGTGGGTTCAGCTAGTAGTATTGGTGTAAATTGGGGCACACAGTCAACACACCCTTTGGGAGCGTCGACGGTGGTGAAAATGCTGAAAGACAATGGTATTCAGAAGATTAAGCTTTTTGATGCAGATTCCAGTATTTTAGATGCTCTGAAGAAGTCTGGGGTTCAGGTGATGGTGGGTATTCCAAATGACATGCTCTATTCTCTGGCTAACAGTGTGCAAGCTGCTGAAAAATGGGTTTCCAAAAATGTTTCCGCCCACGTCTCTTCTGGCGGAGTAGACATCAGGTACGTTGCAGTGGGGAATGAACCTTTTTTGTCAACATACAATGGCACCTTTGAATCCACAACTCTTCCAGCTCTTCAAAATATCCAAGCAGCTCTCACAAAAGCTGGTTTGAGCAATCGGGTAAAAGTCACTGTCCCTTTAAACGCCGATGTATATCAGAGTTCATCAGATAAGCCTTCTGATGGGGATTTCCGGCAAGACATCCATGACCTCATGCTGAAGATTGTCAAGTTCTTGAGTGACAATGGAGCCCCATTCACTGTCAACATCTATCCATTTATCAGTCTCTACGCAGATTCCAATTTCCCTGTTGACTATGCCTTTTTTAATGGCTTTCAGACTCCTCTAAATGACAATGGAAAAGTCTATGACAATGTCTTTGATGCTAACCACGATACCCTTGTTTGGGCATTGCAGAAGAATGGCTTTGCAAACTTGCCTATAATTGTTGGGGAAGTTGGGTGGCCTACAGATGGAGACCGGAATGCAAATTTTCAGTATGCCCAACGTTTTAACCAAGGCTTCATGTCCCGCTACATTGCTGGAAAGGGAACCCCGATGAGGCCTGGTCCTATAGATGCATACTTGTTTAGCCTCATAGATGAAGATAATAAGAGCATTCAGCCAGGTAATTTTGAGCGTCATTGGGGATTGTTTTACCTTGATGGACAGCCAAAATACCAGCTTAACCTTGGGTCAACAAGAACAAATGGATTAGTAGGTGCCAGCGGGGTGCATCATCTGGCAAAAAAGTGGTGTGTTTTGAAACCTTCAGCGAACCTGAATGATGATCAATTGGCACCAAGCGTGGCTTATGCTTGTCAAAATGCAGATTGCACCAGTCTTGGTTATGGAACTTCATGTGGGAATTTAGACATTCGTGGTAATATTTCTTATGCATTTAACAGCTACTACCAGATAAATGACCAGATGGACAGTGCCTGCAAGTTCCCAGGACTTTCAGCCGTCACTGACAAAGATCCTTCAGTTGGAGATTGCAAATTCAAAATCATGATCCAGACAGATTCTGCTGCCCTATATGGGAGAGTTGGGCAACTTAGAATTATGTTCTTTGTACTTTTGTTTTTAACCATTCTGTAA 1530 0.4281 MLIKHRRFDLSLNPDFWFSRYTVEQSIEFMEGEKFSRLVAPLFFIALLVGSASSIGVNWGTQSTHPLGASTVVKMLKDNGIQKIKLFDADSSILDALKKSGVQVMVGIPNDMLYSLANSVQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQAALTKAGLSNRVKVTVPLNADVYQSSSDKPSDGDFRQDIHDLMLKIVKFLSDNGAPFTVNIYPFISLYADSNFPVDYAFFNGFQTPLNDNGKVYDNVFDANHDTLVWALQKNGFANLPIIVGEVGWPTDGDRNANFQYAQRFNQGFMSRYIAGKGTPMRPGPIDAYLFSLIDEDNKSIQPGNFERHWGLFYLDGQPKYQLNLGSTRTNGLVGASGVHHLAKKWCVLKPSANLNDDQLAPSVAYACQNADCTSLGYGTSCGNLDIRGNISYAFNSYYQINDQMDSACKFPGLSAVTDKDPSVGDCKFKIMIQTDSAALYGRVGQLRIMFFVLLFLTIL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0777 509 ProSitePatterns Glycosyl hydrolases family 17 signature. 289 302 IPR000490 GO:0004553|GO:0005975
Glsi10g0777 509 Pfam Glycosyl hydrolases family 17 55 373 IPR000490 GO:0004553|GO:0005975
Glsi10g0777 509 SUPERFAMILY (Trans)glycosidases 55 373 IPR017853 -
Glsi10g0777 509 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 46 467 IPR044965 GO:0004553|GO:0005975
Glsi10g0777 509 Gene3D - 391 488 - -
Glsi10g0777 509 FunFam Glucan endo-1,3-beta-glucosidase 5 54 380 - -
Glsi10g0777 509 Pfam X8 domain 394 463 IPR012946 -
Glsi10g0777 509 Gene3D Glycosidases 53 381 - -
Glsi10g0777 509 FunFam Glucan endo-1,3-beta-glucosidase 8 390 487 - -
Glsi10g0777 509 SMART X8_cls 394 478 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0777 Glsi-ChrGlsi10 4983823 4987359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0777 35 508 Glycoside Hydrolase AT4G31140 69.665 0.0 702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1523 08 11025712 11027798 Glsi10g0777 10 4983823 4987359 CCT