Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1523 ATGGAGTTGATGGGAGGAGTGAAATTTAGTGGATTGCTTCTTGTCCCTTTGCTGTTGGTGGGTTCAGTGAGTGGAATTGGGGTAAATTGGGGGACACAGTCAACACACCCTTTGGCAGCATCGACGGTGGTGAAAATGCTAAAGGACAATGGCATTCAGAAGGTGAAGCTCTTCGACGCTGATACAGATATTCTAGATGCTCTAAAGAAGTCTGGGATCCAGGTGATGGTGGGTATTCCAAATGATATGCTCTATTCGCTGGCTAACAGTATGCAATCAGCTGAAAAATGGGTTTCCAAAAACGTTTCCGCTCACGTCTCCTCTGGCGGAGTAGACATCAGGTATGTTGCAGTGGGGAATGAACCTTTCTTGTCAACATACAATGGCACCTTTGAATCCACTACTCTTCCTGCTCTTCAAAATATCCAGTCAGCTCTCATAAAATCTGGTTTGGGCAATCAAGTTAAAGTCACTGTCCCTTTGAATGCTGATGTTTATCAGAGTTCATCAGACAAACCTTCTGAGGGCGACTTCCGGTCTGACATCCATGACCTGATGCTGCAGATTGTCAAGTTCTTGAGTGACAATGGAGCTCCATTCACTGTCAACATCTACCCTTTCATCAGCCTCTACAAAGATCCCAATTTTCCTGTTGACTACGCATTTTTCAATGGATATCAGACTCCTATAAACGACAATGGAAAGATCTATGATAATGTCTTTGATGCTAACCATGATACCCTTGTATGGGCATTGCAGAAGAATGGATTTGGAAACTTACCCATAGTTGTGGGAGAAATTGGGTGGCCTACAGATGGAGACCGAAATGCAAATCTTCAGTATGCCCAGCGTTTCAACCAAGGGTTCATGTCTCGCTATGTTGCTGGAAAGGGGACCCCAATGAGGCCTGGTCCTATAGATGCCTACTTATTTAGCCTCATAGATGAAGATAATAAGAGCATCCAGCCAGGTAATTTTGAACGTCACTGGGGGTTGTTTTACTTTGACGGTCAGCCAAAATACCAGCTCAACTTTGGGTCAACAAGAAGCAATGGGTTAGTAGGAGCTAGTGGTGTGCATTATCTGGCCAAAAAGTGGTGTGTTTTGAAACCTTCAGCGAATCTTAATGATGAACAAGTGCCACCAAGCGTGGCTTATGCTTGTCAAAATGCAGATTGCACCAGTCTTGGATATGGAACGTCGTGCGGTAATTTGGATACTCGGGGTAATATCTCTTATGCATTTAACAGCTACTACCAGGTAAATGACCAGATTGACACTGCTTGCAAGTTCCCTGGACTTTCCGTTGTCACAGACAGAGATCCTTCAGTTGGAGACTGCAAATTCAGAATCATGATCCAGACAGATTCTGCCAACCCAGATGGAAGAGTTGGGTCTTATATGATAGTGATGCTTGTATTTTTGTTTTTCACTATCCTGTAA 1443 0.4387 MELMGGVKFSGLLLVPLLLVGSVSGIGVNWGTQSTHPLAASTVVKMLKDNGIQKVKLFDADTDILDALKKSGIQVMVGIPNDMLYSLANSMQSAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALIKSGLGNQVKVTVPLNADVYQSSSDKPSEGDFRSDIHDLMLQIVKFLSDNGAPFTVNIYPFISLYKDPNFPVDYAFFNGYQTPINDNGKIYDNVFDANHDTLVWALQKNGFGNLPIVVGEIGWPTDGDRNANLQYAQRFNQGFMSRYVAGKGTPMRPGPIDAYLFSLIDEDNKSIQPGNFERHWGLFYFDGQPKYQLNFGSTRSNGLVGASGVHYLAKKWCVLKPSANLNDEQVPPSVAYACQNADCTSLGYGTSCGNLDTRGNISYAFNSYYQVNDQIDTACKFPGLSVVTDRDPSVGDCKFRIMIQTDSANPDGRVGSYMIVMLVFLFFTIL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1523 480 Pfam Glycosyl hydrolases family 17 26 345 IPR000490 GO:0004553|GO:0005975
Glsi08g1523 480 Pfam X8 domain 365 434 IPR012946 -
Glsi08g1523 480 SMART X8_cls 365 449 IPR012946 -
Glsi08g1523 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Glsi08g1523 480 Gene3D - 361 459 - -
Glsi08g1523 480 SUPERFAMILY (Trans)glycosidases 26 345 IPR017853 -
Glsi08g1523 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 438 IPR044965 GO:0004553|GO:0005975
Glsi08g1523 480 FunFam Glucan endo-1,3-beta-glucosidase 8 361 458 - -
Glsi08g1523 480 Gene3D Glycosidases 25 352 - -
Glsi08g1523 480 FunFam Glucan endo-1,3-beta-glucosidase 5 25 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1523 Glsi-ChrGlsi08 11025712 11027798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1523 3 479 Glycoside Hydrolase AT4G31140 68.930 0.0 705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1523 08 11025712 11027798 Glsi10g0777 10 4983823 4987359 CCT