Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0748 ATGCTCAAGCAATTTCTCAGTAGACTTCCTCGGAAGTCACCCAAATCCGACTCGAACGAGTCAAATCGGGGCGATTCTTCACGTTCCGTCGCTTCCCCACGCGCTACCGGTAGGAGTCATCGCTCACACAGTGGGAATTCTTCCAGTCGATCCAACACTGCCAAACGCACTTCTTCGTCGGCGGTTTTTCCGGCGAGCATCGTGTCTGGGATCGAACCCTTGGTGCCATTCAAAGATGTACCCAATGGGGAAAAGATGAACCTTTTTGTGAGCAAGTTGAGCCTTTGTTGTGTTACCTTCGATTTTACTGACGCCGGTAAAAATACTGTGGAGAAAGATGTCAAAAGGCAAACTTTGCTTGAACTTGTCGATTTTGTGGCTTCTGGATCGACGAAATTCAGTGAACATGCTATCTTTGCTATGTGCAGAATGTGTGCTATCAATCTCTTTAGAGTTTTCCCGCCTAACTACCGGTCGAAAGGGGGTAGCGCAGGTGGCGAGAATGATGATGTTGAGCCGACATTTGATCCTGCTTGGCCACATTTACAGATTGTGTATGAGTTACTGCTTAAATTTATCAATTCTTCGTGTCTTGATGCCAAGGTGGCGAAGAAGTATATCGACCATTCATTTATTTCAAGATTGCTCGAGTTGTATGATACAGAGGATCCAAGAGAAAGAGACTGCTTGAAAACAATTCTGCATAGGATTTATGGGAAGTTCATGGTGCATAGGCCTTATATTCGAAAATCTATTAACAATATATTTTATCGGATTGTGTTTGAGACTGAGAAACACAATGGAATTGCTGAGTTATTGGAGATTTTCGGAAGCATAATTTGTGGGTTTGCTTTACCTTTGAAAGAGGAACACAAAATCTTCTTGTGGAGGGTTTTGATCCCCTTGCACAAGCCGAAATTTGCGGGTGTTTATTTTCAACAATTATCCTACTGTATCACACAGTTTATAGAGAAGGAGCCGAAGTTAGCGAGCACTGTGATAAGGGGTTTGTTAAAATACTGGCCATTAACAAATAGTCAGAAAGAGGTGATGTTCTTGAGTGAACTGGAAGAGATTTTGGAAGTTATCAACATGGTAGAGTTCCAGAGGGTCATGGTCCCATTGTTTTGGCGGATTGGGTGCTGCATGAACAGTTTACACTTTCAGGTAGCCGAAAGGGCCCTTTTCTTATGGAATAATGACCATATCGTCAACTTGATAGCACATAATCGTCAGGTGATCCTACCCATCATTTTTCCAGCTTTAGAGAGGAACTCTCAGAGCCACTGGAACCACGCTGTAATCAACTTAACTCTTAATGTTAGAAAGATGTTCATGGAGATGGATGAGAGGCTCTTTCTGTCCTGTCATTGTCACTTCAAGGAGGAAGAAGCAATTCTAAGCTCAACAGCTGAGCAGCGAAAGGAAGCATGGAAACGACTAGAGCATGCAGCCAGTCTCCAACCTGTAATTGGAAATACCGCAGTCTTGGTGTCTCCTGTGATAACCTGA 1512 0.4345 MLKQFLSRLPRKSPKSDSNESNRGDSSRSVASPRATGRSHRSHSGNSSSRSNTAKRTSSSAVFPASIVSGIEPLVPFKDVPNGEKMNLFVSKLSLCCVTFDFTDAGKNTVEKDVKRQTLLELVDFVASGSTKFSEHAIFAMCRMCAINLFRVFPPNYRSKGGSAGGENDDVEPTFDPAWPHLQIVYELLLKFINSSCLDAKVAKKYIDHSFISRLLELYDTEDPRERDCLKTILHRIYGKFMVHRPYIRKSINNIFYRIVFETEKHNGIAELLEIFGSIICGFALPLKEEHKIFLWRVLIPLHKPKFAGVYFQQLSYCITQFIEKEPKLASTVIRGLLKYWPLTNSQKEVMFLSELEEILEVINMVEFQRVMVPLFWRIGCCMNSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALERNSQSHWNHAVINLTLNVRKMFMEMDERLFLSCHCHFKEEEAILSSTAEQRKEAWKRLEHAASLQPVIGNTAVLVSPVIT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0748 503 MobiDBLite consensus disorder prediction 1 58 - -
Glsi10g0748 503 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 486 IPR002554 GO:0000159|GO:0007165|GO:0019888
Glsi10g0748 503 MobiDBLite consensus disorder prediction 23 58 - -
Glsi10g0748 503 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Glsi10g0748 503 Gene3D - 81 484 IPR011989 -
Glsi10g0748 503 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 81 484 - -
Glsi10g0748 503 SUPERFAMILY ARM repeat 87 481 IPR016024 -
Glsi10g0748 503 PIRSF PP2A_B56 4 498 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0748 Glsi-ChrGlsi10 4735572 4738174 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0748 10 4735572 4738174 Glsi08g1541 08 11131143 11133462 CCT