Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0743 ATGATGGCTACTCTGTCTGAAGCCTACAGAGACCACCCTCTCCACCTCCGTCATATAATCCCCTTGGACTTTTCTTCGGTTGGGAGCTTACCCGATTCTCATGCATGGCCTCGATTTGACGATGATTATGGATGGTCCGACGAAGCCGGATTATCCATACCCATCATCGACCTCACGGATCCTAATGCGATGGAACTCATAGGCCTTGCATGCGAGAAGTGGGGTGCCTTCCAATTGAAGAACCATGGGATACCCTTGAGTCTTGTTGAAGAGGTTGAGTCACAGGCAAAGCGTCTCTTTGCTCTTCCCGCGGAGCAAAAGTTGAAGGCCTTAAGATCTCCGGGTGGAGCCACCGGATATGGTAGAGCACGGATATCACCATTCTTCCCCAAGGACATGTGGCACGAAGGATTTACTATCATGGGTTCTCCATTCCATGATGCCAAACAGATTTGGCCTAATGACTACGCACGGTTTTGTGATTTGATGGAAAACTATCAGAAGCAAATGAAGGAGCTAGCGGAGAAGCTAACACACTTGATCTTCAACTTGTTGGAGATTACTGAGGAAGAAATGAAGTGGGTTGGTTCAAGCAGCAGCACGGGAGCTGTTCAGTTGAATTACTACCCAAGCTGTCCTGAACCAAACCGAGCCATGGGTCTAGCCCCACACACGGACACTTCCCTCCTCACAATACTCCACCAAAGCCAAACCAATGGCCTCGAAATCTTCAAGGAAGGAGTTGGGTGGGTTCCGGTGCAGCCAGAACCGTGTGCACTGGTGGTCAACGCCGGTGACCTCGTTCACATAATGTCAAACGCAAGGTTTCCGTGTGCGCTTCATCGTGTTACAGTGAATAGGATCCAGCAAAGATACTCGGTGGCTTATTTCTATGGCCCGCCAGTAGATTATGTGGTGTCGCCTTTCGCCACGAGGGTTTTGGACTCTGCTTCACGTTTTCGCGCTGTCACCGTGAAGGAGTATATCGGGATTAAGGCCAAGAATCTAGGGGATGCACTATCTTTGATTAGCACTTAA 1038 0.4961 MMATLSEAYRDHPLHLRHIIPLDFSSVGSLPDSHAWPRFDDDYGWSDEAGLSIPIIDLTDPNAMELIGLACEKWGAFQLKNHGIPLSLVEEVESQAKRLFALPAEQKLKALRSPGGATGYGRARISPFFPKDMWHEGFTIMGSPFHDAKQIWPNDYARFCDLMENYQKQMKELAEKLTHLIFNLLEITEEEMKWVGSSSSTGAVQLNYYPSCPEPNRAMGLAPHTDTSLLTILHQSQTNGLEIFKEGVGWVPVQPEPCALVVNAGDLVHIMSNARFPCALHRVTVNRIQQRYSVAYFYGPPVDYVVSPFATRVLDSASRFRAVTVKEYIGIKAKNLGDALSLIST 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0743 345 FunFam Gibberellin 3-beta-dioxygenase 1 18 331 - -
Glsi10g0743 345 Gene3D - 51 341 IPR027443 -
Glsi10g0743 345 SUPERFAMILY Clavaminate synthase-like 18 337 - -
Glsi10g0743 345 Coils Coil 156 183 - -
Glsi10g0743 345 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 300 IPR005123 -
Glsi10g0743 345 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Glsi10g0743 345 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 53 328 - -
Glsi10g0743 345 Pfam 2OG-Fe(II) oxygenase superfamily 204 300 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0743 Glsi-ChrGlsi10 4709029 4710718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0743 49 328 Glycosyltransferase AT5G59530 30.201 8.84e-33 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1546 08 11159705 11160840 Glsi10g0743 10 4709029 4710718 CCT