Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0698 ATGATGGATCCAAATAATCATCCACCTGCTGATAGCCTTGAAACAGTCCACCAAAATGGTGTTCATGAAGAAAAACCTTTTAACTCTGGAAACGATGGTGTAGTCTCAGATGGCATAGACCCCAATGTTGCTAAAATTGCAGAAACTGTTGCTTTAAATGGAGATTTTGAAAAAGTTGTCCAGTTGGATAAGACTGCAACTAATGACTTATCTGTGGGAGAAATCAAAGAGGGATCAAATGACAATGTGGACAGCAACAATCTGACCATTTCAAAGGAAGGGGAAGCGACAATCACAGGTCGAACAAAACAATCAAGAGCAACAAAGGGTTCTGTCAAGAATAAGAATGTGAAGCCCCCAAGTCCTAAAGGTGTTCATGCTGGTTGGGCGAAAAAGAGCAAAGACGGAGAAGATGAAGCAGCATTATCTGCTGTCCCAAATGGTACTCTGTCCTTAAACAATCTCTCAAGACAACCTATTAAAAGTAGATCATTCAATGAGAGTCAGACTCAAATGTCCAAGCACTCCGGAAAGTCTGATGCAGCATCTTCCAAAGCACCCTTGGAGAAGACAATACCAAAACTATTGAAGGAAGGACCTCTTGATGAAGTTCAAGGAGAAGCAGAATCTTCGTTAAGTACCATTGCAGAAGATGCCAAAGCCCGCAGGGCAGGGACACTTCCTAATTATGGATTCAATTTCAAGTGTGATGAAAGAGCTGAGAGAAGAAAAGAGTTCTACTCTAAGCTTGAGGAAAAAATTCATGCAAAGGAAGTGGAGAAGAGTAACTTGCAAGCAAAGACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGGAGGAGTCTAGCATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCTAAGGTTGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGAAAGAAGAGTTCCAACAATTCAGAGTCAGAAAGAAACACTAGCAGCAATGGTCGACAAGGTCGTTTAAGTCTGGATGAGAAAGTGTCTCAGAGTAAGCCCACTAAGGTTGTTACGCCTGTCCATCAAAAAAAGCCACAACGGAGATCTCTTCCTCCTCGACTGCATTCTGAGAAGACCAGTTCATCCAATTTAACAACTGCAGGCACTTCATCTAAGGCAATGAATGACCGAAAGACCTCATTGTCCGGGGTAACAAAGAAAGGTAGCACCTGTTCCAATGCAACCGAGGAAGAGAAAACGAAGATGGTTGCAGCCAGTGAAGAGAACAATACTGTGTCAAGTGAGACAAGTGAAGCCCCACCTCATATCGAAGAGCAGAATGCAGTTCTTTCAGACAAGCCTAGTGAAGTAAAATCTCATGTGAACGGTGACATAGAGGTTGAAGAGCAACATCAGATTGCGTTGGTACAAGAACCTATGGCAGCAGAACATTAA 1452 0.4284 MMDPNNHPPADSLETVHQNGVHEEKPFNSGNDGVVSDGIDPNVAKIAETVALNGDFEKVVQLDKTATNDLSVGEIKEGSNDNVDSNNLTISKEGEATITGRTKQSRATKGSVKNKNVKPPSPKGVHAGWAKKSKDGEDEAALSAVPNGTLSLNNLSRQPIKSRSFNESQTQMSKHSGKSDAASSKAPLEKTIPKLLKEGPLDEVQGEAESSLSTIAEDAKARRAGTLPNYGFNFKCDERAERRKEFYSKLEEKIHAKEVEKSNLQAKTKETQEAEIKMLRRSLAFKATPMPSFYQEPPPPKVELKKIPTTRAKSPKLGRKKSSNNSESERNTSSNGRQGRLSLDEKVSQSKPTKVVTPVHQKKPQRRSLPPRLHSEKTSSSNLTTAGTSSKAMNDRKTSLSGVTKKGSTCSNATEEEKTKMVAASEENNTVSSETSEAPPHIEEQNAVLSDKPSEVKSHVNGDIEVEEQHQIALVQEPMAAEH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0698 483 MobiDBLite consensus disorder prediction 73 115 - -
Glsi10g0698 483 Pfam Targeting protein for Xklp2 (TPX2) domain 232 302 IPR027329 -
Glsi10g0698 483 MobiDBLite consensus disorder prediction 374 440 - -
Glsi10g0698 483 MobiDBLite consensus disorder prediction 1 39 - -
Glsi10g0698 483 MobiDBLite consensus disorder prediction 286 458 - -
Glsi10g0698 483 MobiDBLite consensus disorder prediction 146 180 - -
Glsi10g0698 483 MobiDBLite consensus disorder prediction 73 212 - -
Glsi10g0698 483 Coils Coil 247 267 - -
Glsi10g0698 483 PANTHER PROTEIN WVD2-LIKE 4 100 453 IPR044833 GO:0008017
Glsi10g0698 483 MobiDBLite consensus disorder prediction 327 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0698 Glsi-ChrGlsi10 4463066 4466456 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0698 10 4463066 4466456 Glsi08g1595 08 11414845 11418227 CCT
Glsi10g0698 10 4463066 4466456 Glsi10g0698 10 4463066 4466456 ECH