Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1595 ATGGCAGAAATCAAAGAGGAATCAAATGACACCACGGACGGCAACAATGTGACCATTCCTGAGGAAGAAAAAGTGAATATCACATATCAAACAGAGCAATTAAGAGCATCAAAGGGTCCTGTCAAGAACAAGAATGCGAAGCCCCCTAGTCCTAAAGGTGTTCATGCAAGTTCGGTTGAAAAAAACAAGGATGGAAAGGATCAAGAGGCACAATCTTCTGTTCCCAATGGTACTTCAGCTTTAAAAGCTCGACAGCCTATTAAAAGCAGATCATTCAATGACCGGCAGACTCAAAATTCCAAGCACACTGGAAAGTCTGATGCAGCATCTTTGGAAGCACCCATGGAGAAGACAAAACCAAAATTTTTGAAGAAAGGAACTCTTGATAACGTTCAAGGAGAAGCACAATCTTCTTTAAGTATCACTGCAGGAGATGGCAAACCTCACAAGGTGGGGACACTTCCAAATTATGGATTTAGTTTTAGGTGTGATGAACGAGCTGAGAGACGAAAAGAGTTCTACACTAAACTCGAGGAAAAGATTCATGCAAAGGAAATGGAGAAGAGTAACTTGCAAGCAAAATCCAAGGAGACTCAAGAAGCTGAGATTAAGATGCTTAGGAAGAGTCTAACATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCAAAGGTGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCACCCAAGCTTGGTCGAAGGAAGAATTCAATTGACTCAGAGTCAGATGGAAACCCTAGTAGTATTGCTGGACAAGGTCGTTTAAGTCTGGATGAGAAAGTGTCTCAGAGTATCCCCACTAAGGGAGCTACTCATGTCCATCAAAAAAAGCCACAACGGAGATCTCTGCCTCCTCGGCTGCCTTCTGAAAGGATCAGTTCATCCAATTCAACAATTGCAGCCACTTCATCAAAGGCCCTGAATGATAAAAAAGCCTTCGTATCCAGTGTGACAAACAAAGATACCACCTTGTACAATGCGACAGGGAAAGAGAAATCTCAGATGGATGCAGCCAAGGAAGAGAATGGTACCTTGTCCTATGAGACAAGCGAAGCTCCATCTCTCATCGAAGAGCAAAATGAAGTACCCTTAGACAAGCCAATTGAAGCAGAGCCTCGTGTTAATGGTGACGTAGTGGTTGAAGAGCAACCTCAGCTCGTCTTGGTACACGAACCTATAGCAGCAGAGCATTAA 1233 0.4323 MAEIKEESNDTTDGNNVTIPEEEKVNITYQTEQLRASKGPVKNKNAKPPSPKGVHASSVEKNKDGKDQEAQSSVPNGTSALKARQPIKSRSFNDRQTQNSKHTGKSDAASLEAPMEKTKPKFLKKGTLDNVQGEAQSSLSITAGDGKPHKVGTLPNYGFSFRCDERAERRKEFYTKLEEKIHAKEMEKSNLQAKSKETQEAEIKMLRKSLTFKATPMPSFYQEPPPPKVELKKIPTTRAKSPKLGRRKNSIDSESDGNPSSIAGQGRLSLDEKVSQSIPTKGATHVHQKKPQRRSLPPRLPSERISSSNSTIAATSSKALNDKKAFVSSVTNKDTTLYNATGKEKSQMDAAKEENGTLSYETSEAPSLIEEQNEVPLDKPIEAEPRVNGDVVVEEQPQLVLVHEPIAAEH 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1595 410 MobiDBLite consensus disorder prediction 352 369 - -
Glsi08g1595 410 MobiDBLite consensus disorder prediction 69 106 - -
Glsi08g1595 410 Pfam Targeting protein for Xklp2 (TPX2) domain 159 229 IPR027329 -
Glsi08g1595 410 PANTHER PROTEIN WVD2-LIKE 4 29 354 IPR044833 GO:0008017
Glsi08g1595 410 MobiDBLite consensus disorder prediction 301 343 - -
Glsi08g1595 410 MobiDBLite consensus disorder prediction 1 128 - -
Glsi08g1595 410 MobiDBLite consensus disorder prediction 254 283 - -
Glsi08g1595 410 Coils Coil 174 201 - -
Glsi08g1595 410 MobiDBLite consensus disorder prediction 139 158 - -
Glsi08g1595 410 MobiDBLite consensus disorder prediction 207 388 - -
Glsi08g1595 410 MobiDBLite consensus disorder prediction 11 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1595 Glsi-ChrGlsi08 11414845 11418227 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0698 10 4463066 4466456 Glsi08g1595 08 11414845 11418227 CCT
Glsi08g1595 08 11414845 11418227 Glsi08g1595 08 11414845 11418227 ECH