Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0629 ATGGCGTTTTGGAGATCTCTCGCCTTCCCTACGCTGATGTTTTACGCAACTCTTTTGCTTCTCATCCATGGCGCTCACTGCTTCTATCTCCCCGGCGTCGCTCCACAGGACTTCGAAAAGGGAGATCCGTTGCAAGTGAAAGTTAACAAATTAACATCGACAAAGACTCAGCTTCCTTACACATATTATTCACTTCCTTATTGTCGCCCAAAACAAATACAGGACAGTGCAGAAAATCTTGGGGAAGTACTTCGTGGTGACCGCATTGAAAATTCCCTTTATGCGTTTAAAATGCGTGAGCCACAAATGTGTAATGTCGTGTGTAAGCTTACGCTTGATGCCAAAACTACAAAGGAGTTTAAAGAGAAGATTGATGATGAGTATCGAGTGAACATGATCCTAGATAACCTTCCTCTGGTTGTTCCTATAAAACGAATGGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGCCAATATAGTGGGAGCAAGGAGGAGAAGTATTTTATCCACAACCATTTATCATTTACTGTCAAGTATCACAGGGATTTGCAAACTGAATCTGCCAGAATTGTGGGCTTTGAGGTTAAGCCATTCAGTGTTAAACATGAATATGAAGGGAAATGGGATGAAAATACTCGCTTGACAACCTGCGATCCTCATGCCAAACACACAGTTGTTAACTCCAATACTCCTCAAGAGGTTGAAGAGAACAAGGATATTATATTCACATATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCACGATGGGATGCCTATCTTCTCATGAGTGATGACCAAATTCACTGGTTCTCAATTGTGAACTCATTGATGATTGTTCTCTTCCTCTCGGGCATGGTGGCAATGATAATGCTTCGTACACTTTACCGTGACATTTCAAAATACAATGAGCTTGAGACTCAGGAGGAAGCCCAAGAAGAGACTGGATGGAAGCTTGTCCACGGGGATGTTTTTAGACCCCCTAACAACTCGGATCTGCTATGTGTTTATGTTGGAACCGGTGTTCAATTTTTGGGGATGATACTAGTAACCATGATATTTGCGATCCTTGGGTTCCTCTCTCCTTCAAACCGAGGTGCGTTAATGACAGCTATGCTCCTGCTTTGGGTCTTCATGGGACTTTTTGCTGGTTACTCGTCATCTCGCTTGTACAAAATGTTCAAAGGATCTGAGTGGAAGAAGATTGCCCTCAGGACTGCACTCATGTTCCCAGCAGTTGTCTCTGCCATTTTCTTTGTATTGAACGCTCTCATATGGGGCCAAAAATCATCTGGAGCTGTGCCTTTTGGTACAATGTTTGCTTTGATCTTTTTATGGTTTGGGATCTCAGTTCCACTTGTTTTTGTGGGTAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAATCCCGTGAAGACAAACAAAATCCCAAGGCAGATTCCTGAGCAGGCCTGGTACATGAACCCGGTCTTCTCAGTTCTGATTGGAGGAATACTCCCATTTGGAGCCGTTTTCATTGAGCTTTTCTTCATTCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGTTTCCTCTTTTTGGTCTTCATCATTCTCATCGTCACTTGTGCAGAAATAACCATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCGTACCTCACATCTGGCTCTTCTGCACTTTACCTCTTCCTTTATGCAACATTTTACTTCTTCACCAAGCTTGAAATCACGAAGTTGGTATCTGCTATATTGTACTTCGGGTACATGCTTATAGCTTCGTATGCATTTTTTGTGCTAACCGGTACCATCGGATTCTATGCATGCTATTGGTTCACCAGGCTTATCTACTCCTCGGTGAAGATTGATTAG 1923 0.429 MAFWRSLAFPTLMFYATLLLLIHGAHCFYLPGVAPQDFEKGDPLQVKVNKLTSTKTQLPYTYYSLPYCRPKQIQDSAENLGEVLRGDRIENSLYAFKMREPQMCNVVCKLTLDAKTTKEFKEKIDDEYRVNMILDNLPLVVPIKRMDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLSFTVKYHRDLQTESARIVGFEVKPFSVKHEYEGKWDENTRLTTCDPHAKHTVVNSNTPQEVEENKDIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFLGMILVTMIFAILGFLSPSNRGALMTAMLLLWVFMGLFAGYSSSRLYKMFKGSEWKKIALRTALMFPAVVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYAFFVLTGTIGFYACYWFTRLIYSSVKID 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0629 640 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 27 640 IPR004240 GO:0016020
Glsi10g0629 640 Pfam Endomembrane protein 70 59 596 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0629 Glsi-ChrGlsi10 3948262 3952277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0629 19 640 Miscellaneous Gene Families AT5G10840 87.340 0.0 1123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0629 10 3948262 3952277 Glsi08g1660 08 11845979 11849437 CCT
Glsi10g0629 10 3948262 3952277 Glsi10g0629 10 3948262 3952277 ECH