Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1660 ATGGCGTTTTGGAGATCTCTCACTGTTCCTACACTGACGTTCTCTGCGATTCTTCTACTTCTCATCCATGGCGGTCACTGTTTCTATCTCCCTGGCGTCGCTCCACAGGATTTTCAAAAGGGAGATACATTGCCAGTGAAAGTAAACAAATTAACATCGACAAAGACTCAGCTTCCTTACTCATATTATTCGCTACCTTATTGTAGCCCAGGAAAAATAGTAGATAGTGCAGAAAATTTGGGCGAAGTGCTTCGTGGTGACCGCATTGAAAATTCTCTTTATGTGTTTAAAATGCGTGAGCCACAAATGTGTAATGTTGTGTGTAAGATTACACTTGATGCCAAAACTGCAAAGGAGTTTAAAGAGAAGATTGATGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTGGTTGTTCCTATAAAACGAATGGATCAGGACTCTACTGTTTATCAGCTTGGTTTCCATGTTGGGCTTAAAGGGCAATATAGTGGGAGCAAGGAGGAGAAGTATTTTATCCACAACCATTTGTCGTTTACTGTCAAGTATCATAGAGATTTGCAAACTGACTTGGCAAGAATCGTGGGTTTTGAGGTTCAGCCATTCAGTGCTAAACATGAATATGAAGGGAAATGGGATGAAAAAACCCGATTGACAACATGTGACCCTCATACCAAACACACAGTTGTTAACTCCAACACTCCTCAAGAGGTTGAAGAGAACAAGGATATAATATTTACTTATGATGTTGAATTTCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTAAACTCGTTGATGATTGTTCTATTTCTCTCGGGTATGGTGGCAATGATAATGCTGCGCACACTTTATCGTGACATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTTCATGGGGATGTTTTTAGACCCCCTAACAACCCAGATTTGCTATGTGTTTATGTGGGAACTGGTGTTCAGTTTTTTGGGATGATTCTAGTAACTATGACATTTGCCATCCTTGGGTTCCTTTCTCCTTCAAACAGAGGTGGGCTAATGACAGCCATGCTATTGCTGTGGGTCTTCATGGGACTTTTTGCTGGGTACTCTTCAGCACGCTTATACAAAATGTTTAAAGGAACAGAGTGGAAGAGAATTGCCTTCAGGACTGCAGTCATGTTCCCTGCAATTGTCTCTGCCATTTTCTTTGTATTAAATGCTCTCATTTGGGGCCAAAAATCATCTGGAGCAGTGCCTTTTGGTACAATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCGGTTCCACTTGCTTTTGTGGGTAGCTATGTTGGATTCAGGAAGCCTGCAATTGAGAATCCCGTGAAGACAAACAAAATCCCAAGGCAGATCCCTGAGCAGGCCTGGTACATGAACCCTGTCTTCTCAGTTCTGATTGGGGGAATACTCCCATTTGGAGCCGTATTCATAGAGCTTTTCTTCATCCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGTTTTCTCTTTTTGGTCTTCATAATCCTGATGGTCACTTGTGCAGAGATAACCATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAAGATTACTCGTGGTGGTGGCGGTCATACCTCACATCTGGCTCTTCTGCTCTTTACCTCTTCCTTTATGCGACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGCTGGTATCTGGGATCTTGTACTTCGGGTACATGCTTATAGCTTCTTATGCATTTTTTGTGGTAACTGGTACCATCGGATTCTATGCATGCTTTTGGTTCACAAGGCTCATCTACTCGTCGGTGAAAATTGATTAG 1923 0.4212 MAFWRSLTVPTLTFSAILLLLIHGGHCFYLPGVAPQDFQKGDTLPVKVNKLTSTKTQLPYSYYSLPYCSPGKIVDSAENLGEVLRGDRIENSLYVFKMREPQMCNVVCKITLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPIKRMDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLSFTVKYHRDLQTDLARIVGFEVQPFSAKHEYEGKWDEKTRLTTCDPHTKHTVVNSNTPQEVEENKDIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNPDLLCVYVGTGVQFFGMILVTMTFAILGFLSPSNRGGLMTAMLLLWVFMGLFAGYSSARLYKMFKGTEWKRIAFRTAVMFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLAFVGSYVGFRKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILMVTCAEITIVLCYFQLCSEDYSWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGILYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1660 640 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 27 640 IPR004240 GO:0016020
Glsi08g1660 640 Pfam Endomembrane protein 70 59 596 IPR004240 GO:0016020
Glsi08g1660 640 SUPERFAMILY MFS general substrate transporter 278 468 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1660 Glsi-ChrGlsi08 11845979 11849437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1660 5 640 Miscellaneous Gene Families AT5G10840 85.110 0.0 1115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0629 10 3948262 3952277 Glsi08g1660 08 11845979 11849437 CCT
Glsi08g1660 08 11845979 11849437 Glsi08g1660 08 11845979 11849437 ECH