Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0506 ATGGAACGTGCACGGCGGATCGCGAACAGGGCGATTCTGAAACGCCTGCTTTCACAGGCCAAGCAGTACCGCCAGAATGAATCTATATTGAACTCTGCCACCCCTGTACTGTACACACCTTCGAGGTACGTATCATCACTTTCTCCCTCTGCTTTCCGAGGCAGAGGATCCAAATCAGAAAACTTGCTGGGCAGGAATCTGTCATGTAATGTTGGTTTTGGTGCTGGGTCCCAAACTCGATCGATTTCGGTAGAGGCACTCAAACCCAGCGACACTTTTCCCCGTCGCCATAACTCTGCCACCCCCGAGGAACAGAGCAAAATGGCCGAGTCGTGCGGGTTCGATAATCTTGATTCGCTTATCGATGCAACCGTGCCTAAATCGATCCGGTTAAACGATATGAAGTTTAATAAGTTTGACGAGGGTTTGACTGAGAACCAAATGATTGAGCACATGCAATATCTGGCGTCTAAGAACAAAGTTTTTAAGTCATTCATTGGGATGGGGTACTACAACACCTATGTTCCACCAGTGATTTTAAGGAACATAATGGAAAACCCAGCTTGGTACACCCAGTACACTCCTTACCAGGCTGAGATATCTCAGGGACGTCTCGAGTCCTTACTTAATTTTCAGACTATGGTCACCGATCTTACTGGTCTCCCCATGTCTAATGCCTCATTGCTAGATGAAGGAACTGCAGCTGCAGAGGCAATGGCTATGTGTAACAATATTCAGAAGGGAAAGAAAAAGACTTTTGTCATTGCCCATAACTGTCATCCCCAAACCATTGATATTTGTAAGACAAGAGCGGATGGTTTTGATCTTAAGGTTGTTACAGCGGATCTTAACGATATTGATTACAAATCTGGTGATGTTTGTGGTGTCCTTGTTCAGTACCCAGGCACTGAGGGTGAGATTTTGGATTATGGGGAGTTTATCAAGAAAGCCCATGCTCATGGAGTAAAGGTTGTTATGGCAACGGATCTCCTCGCACTGACGGTGTTGAAGCCTCCTGGCGAATTGGGGGCAGACATTGTTGTTGGCTCAGCTCAGAGGTTTGGAGTTCCCATGGGTTATGGAGGTCCTCATGCGGCGTTCCTGGCCACATCCCAAGAATACAAGAGGTTGATGCCTGGAAGAATTATTGGTGTCAGCGTTGATTCTTCTGGAAAGACAGCCTTGCGAATGGCAATGCAAACTAGGGAGCAGCATATTCGTAGAGACAAGGCTACTAGCAATATCTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTTTATCACGGACCTGAAGGTCTTAAAACCATTGCCCAACGTGTTCATGGTCTTGCTGGGGCATTTGCTCTCGGATTAAAGAAACTAGGAACGGTGGAAGTTCAGGATCTTCCCTTTTTTGACACTGTGAAGGTTAACACTGCTAATGCCCATGCAATAGCTGATGCTGCTTACAAAAGTGAAATAAATTTGCGAGTTGTAGATGGAAACACAATCACTGTTTCCTTTGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTTAAAGTTTTTGCTGGCGGCAAGCCTGTCTCCTTCACAGCTGCATCCCTTGCACCAGAGGTTCAGACTGCAGTTCCTTCTGGACTAACTAGAGAGAGTCCTTATCTGACACACTCTATCTTTAACACGTACCACACCGAACATGAGTTGCTCAGGTACATCAGTCGGCTACAGTCAAAGGATCTCTCGCTGTGCCACAGTATGATCCCACTAGGATCTTGTACGATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCTAGTTTTACTGACATTCACCCTTTTGCACCGACTGAACAGGCTCAAGGTTATCAGGAAATGTTCCAAAATTTGGGTGACCTATTGTGTACTATCACTGGGTTTGACTCGTTTTCTTTGCAACCTAATGCTGGTGCTTCCGGAGAATATGCTGGACTAATGGTTATTCGTGCATATCATTTGGCAAGGGGAGACCACCACCGCAATGTTTGCATTATACCTGTCTCAGCACATGGTACAAATCCTGCCAGTGCTGCTATGTGTGGAATGAAAATTGTCCCTGTTGGAACTGATGCCAAGGGAAATATTAATATTGAAGAGTTGAGAAAGGCTGCTGAAACACACAAGGACAACTTATCTGCGCTAATGGTAACATACCCTTCAACCCATGGTGTTTATGAGGAAGGTATTGATGAGATATGCAAGATTATTCATGATAACGGAGGCCAAGTGTATATGGATGGGGCTAACATGAATGCACAGGTGGGGCTTACAAGTCCTGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATCCCACATGGAGGAGGTGGTCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCGCATCCTGTGGTACCCACTGGTGGCATTCCTGCCCCTGACAAGTCTCAACCACTCGGTACCATTTCTGCTGCACCTTGGGGCTCAGCACTCATATTGCCAATCTCTTATACTTACATTGCCATGATGGGCTCTAAAGGACTCACCGAAGCTTCGAAAATAGCCATTTTGAATGCAAACTATATGTCCAAACGATTGGAGAATTATTACCCAGTCCTTTTCCGTGGAGTCAATGGAACAGTCGCTCATGAATTTATTATTGACTTAAGAGGCTTTAAGAATACCGCTGGGATAGAGCCTGAAGATGTGGCAAAGCGCCTTATGGACTATGGATTTCATGGACCAACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAACCCACTGAAAGTGAGAGCAAGGCTGAGTTAGACAGGTTTTGTGATGCTCTTATTTCCATTCGAGAAGAAATTGCTGAGATTGAGAAGGGGAAAGCTGATATTAACAATAATGTACTGAAGGGAGCCCCTCACCCACCGTCTTTGCTGATGGGAGATGCATGGACAAAACCATACTCTCGGGAATACGCAGCCTACCCAGCTTCCTGGCTCCGTGTTTCCAAGTTCTGGCCTTCCACAGGACGCGTGGACAATGTGTACGGTGACCGCAACCTCATCTGCACCCTTCTCCCAGCGTCTCAGGTTGTAGAGGAACAGGCTGCTGCCACAGCATAG 3162 0.4627 MERARRIANRAILKRLLSQAKQYRQNESILNSATPVLYTPSRYVSSLSPSAFRGRGSKSENLLGRNLSCNVGFGAGSQTRSISVEALKPSDTFPRRHNSATPEEQSKMAESCGFDNLDSLIDATVPKSIRLNDMKFNKFDEGLTENQMIEHMQYLASKNKVFKSFIGMGYYNTYVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMVTDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFVIAHNCHPQTIDICKTRADGFDLKVVTADLNDIDYKSGDVCGVLVQYPGTEGEILDYGEFIKKAHAHGVKVVMATDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKTALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGAFALGLKKLGTVEVQDLPFFDTVKVNTANAHAIADAAYKSEINLRVVDGNTITVSFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEVQTAVPSGLTRESPYLTHSIFNTYHTEHELLRYISRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFQNLGDLLCTITGFDSFSLQPNAGASGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVPVGTDAKGNINIEELRKAAETHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPDKSQPLGTISAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMSKRLENYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIEKGKADINNNVLKGAPHPPSLLMGDAWTKPYSREYAAYPASWLRVSKFWPSTGRVDNVYGDRNLICTLLPASQVVEEQAAATA 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0506 1053 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 87 1044 IPR003437 GO:0004375|GO:0006544
Glsi10g0506 1053 NCBIfam aminomethyl-transferring glycine dehydrogenase 96 1037 IPR003437 GO:0004375|GO:0006544
Glsi10g0506 1053 CDD GDC-P 565 960 IPR020581 GO:0004375|GO:0006546
Glsi10g0506 1053 Gene3D Aspartate Aminotransferase, domain 1 165 518 IPR015422 GO:0003824
Glsi10g0506 1053 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 77 1044 IPR020581 GO:0004375|GO:0006546
Glsi10g0506 1053 Coils Coil 712 732 - -
Glsi10g0506 1053 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 853 991 - -
Glsi10g0506 1053 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 176 436 - -
Glsi10g0506 1053 SUPERFAMILY PLP-dependent transferases 96 522 IPR015424 -
Glsi10g0506 1053 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 604 843 - -
Glsi10g0506 1053 FunFam Glycine cleavage system P protein 429 518 - -
Glsi10g0506 1053 Gene3D - 604 855 IPR015421 GO:0003824
Glsi10g0506 1053 Gene3D - 176 436 IPR015421 GO:0003824
Glsi10g0506 1053 SUPERFAMILY PLP-dependent transferases 562 1038 IPR015424 -
Glsi10g0506 1053 Pfam Glycine cleavage system P-protein 96 522 IPR020581 GO:0004375|GO:0006546
Glsi10g0506 1053 Pfam Glycine cleavage system P-protein 539 815 IPR020581 GO:0004375|GO:0006546
Glsi10g0506 1053 Gene3D Aspartate Aminotransferase, domain 1 856 991 IPR015422 GO:0003824
Glsi10g0506 1053 CDD GDC-P 145 522 IPR020581 GO:0004375|GO:0006546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0506 Glsi-ChrGlsi10 3222873 3228078 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0506 10 3222873 3228078 Glsi08g1751 08 12456339 12461814 CCT