Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0497 ATGGCCGCAGAAGCATGCCCTCAGGGTCTAACCCCCGAAGAATATGCTGAACTGGAGCCCATCATCCATAAATACCATAAATTTGAGGCTTCCCCCAACACATGCACATCCATTGTAACGCAACGAATTGAGTGTCCGGCGGGCAGAGTGTGGCCTTTGGTTCGGAGCTTCGAGAACCCTCAGAAATACAAACACTTCATAAAGAGCTGCAACATGAGGGGGGATGGTGGGGTTGGCAGCATTAGAGAGGTCACGGTGGTTTCGGGTCTGCCGGCATCCACCAGCACCGAGAGGCTGGAGATATTGGACGATGACAAACACATACTCAGCTTTAGGGTTGTGGGAGGGGAGCACCGTCTCAAAAATTATCGCTCTGTTACATCTGTTAATGAATTCAACAAGCAAGGTAAGGTATATACTATTGTGTTAGAGTCTTATATTGTGGACATACCCGAAGGCAACACCCGAGAGGATACAAAGATGTTTGTGGACACTGTGGTCAAGCTCAACCTTCAGAAACTTGGGGTGGCAGCCATGGCTACACCGCTTCCACTTGCACAACAATAG 567 0.4921 MAAEACPQGLTPEEYAELEPIIHKYHKFEASPNTCTSIVTQRIECPAGRVWPLVRSFENPQKYKHFIKSCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHILSFRVVGGEHRLKNYRSVTSVNEFNKQGKVYTIVLESYIVDIPEGNTREDTKMFVDTVVKLNLQKLGVAAMATPLPLAQQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0497 188 SUPERFAMILY Bet v1-like 35 175 - -
Glsi10g0497 188 CDD PYR_PYL_RCAR_like 35 174 - -
Glsi10g0497 188 PANTHER - 34 174 - -
Glsi10g0497 188 Pfam Polyketide cyclase / dehydrase and lipid transport 39 174 IPR019587 -
Glsi10g0497 188 Gene3D - 1 184 IPR023393 -
Glsi10g0497 188 FunFam Abscisic acid receptor PYR1 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0497 Glsi-ChrGlsi10 3180044 3180610 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0497 10 3180044 3180610 Glsi08g1758 08 12511681 12512247 CCT
Glsi10g0497 10 3180044 3180610 Glsi10g0497 10 3180044 3180610 ECH