Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1758 ATGGCCTCAGAAGCACAGCCTCAGGGTCTAAGTGGAGCAGAGTTTGCCGAACTCGAGCCCGTCATCAATAAATACCACAAATTTGAGGCATCACCCGACACTTGCACTTCCATTATAGTACAGCGAATCGATGCTCCGGTGCGCACGGTGTGGCCTTTGATTCGGAGCTTTGAAAACCCTCAGAAATACAAGCACTTCATAAAGGGATGCAGCATGAAAGGTGACGGAGGCGTTGGCAGCATTAGAGAGGTGACTGTGGTTTCGGGTCTGCCTGCATCTACCAGCACCGAGAGGCTTGAGATGTTAGACGATGACAACCACATACTCAGCTTTAGGGTTGTGGGTGGCGAGCACCGACTCAAAGATTATCGCTCTGTCACGTCCGTAAATGAGTTTCAAATGGAAGATAGTCACAAGGTCTATACTATTGTTCTCGAGTCTTATATCGTCAACATACCCGAAGGCAACACCCGTGAGGATACAAAGATGTTTGTGGACACTGTGGTCAAGCTCAACCTTCAGAAACTTGGCCTGCTCGCCATGTCTACACTGCATGCACAACCATAA 567 0.4885 MASEAQPQGLSGAEFAELEPVINKYHKFEASPDTCTSIIVQRIDAPVRTVWPLIRSFENPQKYKHFIKGCSMKGDGGVGSIREVTVVSGLPASTSTERLEMLDDDNHILSFRVVGGEHRLKDYRSVTSVNEFQMEDSHKVYTIVLESYIVNIPEGNTREDTKMFVDTVVKLNLQKLGLLAMSTLHAQP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1758 188 CDD PYR_PYL_RCAR_like 35 176 - -
Glsi08g1758 188 PANTHER - 34 176 - -
Glsi08g1758 188 SUPERFAMILY Bet v1-like 35 176 - -
Glsi08g1758 188 Gene3D - 1 188 IPR023393 -
Glsi08g1758 188 Pfam Polyketide cyclase / dehydrase and lipid transport 41 131 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1758 Glsi-ChrGlsi08 12511681 12512247 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0497 10 3180044 3180610 Glsi08g1758 08 12511681 12512247 CCT
Glsi08g1758 08 12511681 12512247 Glsi08g1758 08 12511681 12512247 ECH