Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0324 ATGCAGGCGGTGGGGAGGCTAGGCAGCTACATTAGTCGGGGTGTGTACACTGTGTCAGGCCCCTTTCATCCTTTCGGTGGCGCTGTAGATATTGTTTTAGTTGAACAGGAAGATGGGAGCTTCAAGTCGTCGCCTTGGTACGTACGATTTGGGAAATTCCAAGGGGTTTTAAAGGCAAAGGAGAAGGTAGTCAGCATTAGTGTTAATGGAGTGGAAGCTAATTTCCATATGTATTTGGATCATAAAGGGGAAGCTTTCTTTCTCAGGGAGGTCGAGGCAGTAGAGGGAGAATCTATGATATATCCATCGTTTTCTGGCGATGAGACAGATAGCCCAACCCAGGATAATAAGCTGCTTTTGAATTCCAAAAGTTGTAATTATGGTTCACACAAATCAAATTCTGTGGCTAAGATTGATATAAACAATGGTAACATTGTGGCCGGGACTAATTCTAACCGATCACAGATGATTGGGCTTGCATTTGGGCGGAGGTCTATCGGGGGGAATAATAATTTTCAGGGGGAGTTCGACAATGTTGGTATAAAGAGGGTAGGTTCATTAGAGTGCGCTGAGATTGCAGCCGACCTGATGGAGGCGAAGTGGTCAACTAATCTTGCCGGTGATAAACCATCACGGAAAGCTAGTGAAAAAAATAAAAAAAGCTCATCTCAGCGTGATAACATGGAGAATGCTTTAAACCAACTTACATTATATGAGGAAGCTTGTTCTCACAATGAGCAAGAAGGCATCTGTTCCAAGTCTGACCTTGAAATTCCCGGAGGACTTAGTGAGGAAGAGTGTGAAAACTCGTCATGTTTAAGCACCCCAGACGAAGTTTCCAAAATTTTTATGGTGGGTGAAAGCTTTTCAAAAGAGAAAGCCAAGGTGATAACTGGAGTATCAACGAGTACTGATATTGCAGAGGACACTGAACATGACAGGAAGGTGAAGGAAGTTATATCTGATAGCACCAGGTGTGATTTACGTGCTGCATGTCTAGAGCTTGAAGCACACATTGAAAAGAAGTTGAGTGGAGAAGATGTTTCTAGTGTAAGCGTTAAGCCAGGTTATGGAATTTCTGAGGAGGAGATTTCAGCAGATGGGATTCAGTCGCTAGTTAATGGTGTAACATCAGAGAGTTCTATGGGAGGCATGGATTGTTCCAGCGAACGAACTCATGAGGTGCCGTACCCTGCTATTGGAAGATGTGGAGATGTACATGTTCACGCTGAGGTTTTACAAGCGACTAATTTTCTGCTGCCTGAGGTTACTAAAATAGTGGAAGTCGGTAAGAATGCTAATCTGGGGATGCCAAAAATGAAGGTTTCTCAGCAAACAGATTGTTCTCTTCCTCGTGTCAGTAAGTTTAATGTGGTAGATGTTGAAGACCCACCAACATTGCCAAAACCTCGAAGGGTCAATCTGGATCTAGGACTTTGTTCAGCTGAGAAGGTTGAATCAAACTGTGTTGTCACAACTTCCTCCTATGGCAGCCAGGGTAACCAAACCTTAGAAGAGAAAAATTTGAAGGACGAAGTTGTCTCAAGCACATTAACATCTCTGGAGTCTGTTAGTGATTGTGTCCTTAGAAGAGCAACAAGTAGACTACCATCAGCAAGTTCAGAGGATGAACATTTCTTTTTTAGTGACTTTGATGAATCCAGATTCAGTGATCAATTTGACTGTTCAATCTCCCCTGAATATGTAGATGAAGAAGATCAAGTTTCTTACTTGGATGGCATTGAAAAAGTGAACCAGTTAATTGATAGAAATTACAGTTTGCATTTATCTCCCGAAAACTGTGCCACAGGAAATCAATTGACTGACCTTGAAAACCTGAGAGTAACATCCAGTCCCACAGTTATCCCTAAAAATGAGGATCCTGGGAAGGAAGTCGGGCCGCAGACAAAATCCTTGCCCGGTATGTATTCTTATAGTAATGCTCTGGGTCAGCATGATCTTTGTTATCCTTTAAGTCATTCACTGGACTCAAAGACCCAATTCTTGGAGAAGCCATTGCTTGGCAAAGATGACCTGAAATGTCTAAAATCAGCTGAAGGCAAAGAGAACCAATTATTACCTGAGAAGCCAGGTGCCAAGGACTGCCATGGTTCAGGGATGGGAGTTGATGCTGCCTCTAAAGCTTTTGGTGCTGAAAAATTGGATTTTGATAAATTTACTTCTCTAGGTCCTGAACTAGTGAGGGATAATATGCTTTTTGTCAGATTGGTCATCATTGTTTTAGGCATGGTTTCTTTGGGAAGGCAACAAATATTTAAACCAAAAGGCCTGATGCCTGTTGAGAAAAATCTTACAGGAGACTCATCAGCACTCAGCCCTTCCCCTGGTAGAAACTGGAGACTTTGGCCTTTCTCCTTCAGGAGATCAACATCTAGAGAGGCCATGGTGCCTGCTAGTTATGCCAAAAATACTAATGCTTCAGAGAGCACAATTGAGACAGATGCAAACAAAAATGAGCTCAAACCCAATCCATTGAAAAATAATGCTAGGGCAAACACTCCAACATCTGAACAGCTGGCATCCTTGAATCTAAAGGAAGGGAGAAATACAGTAACCTTTACTTTCTCTACTGGTATGCTAGGGAAGCAACAGGTTGATGCCCAAATATATTTGTGGAAGTGGAACACTCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAAGTTTCTTTTGAGCTTATCATGGTACTTTTCTACTCCTATCACTCAGAGCCTGGAGGGAAACAATCATGGATCTTATAAGAAGTTCAACCTTTGGTTTAAGGGTATCCTTTCTGGAGTTCTCCTTGAAGTGATATCTTGGTCAGACGTTCTAGGTCAGTTCATGCCTTTGGTTGGAGTAGACTGGTCACAGACAGGTGTTGCGCATTTATTCTCAGCTATCAAGGAAAATGGTTACCAACTGCTTTTCCTCAGTGCTCGTGCAATTTCTCAGGCCTATCACACCAGACAATTCCTAATTAACCTTAAGCAGGATGGGAAAGTCTTACCTGATGGTCCTGTAGTTATTTCCCCTGATGGGCTTTTTCCCTCTCTATTTCGAGAAGTTATCAGGAGGACCCCTCATGAGTTCAAAATTGCATGCCTAGAGGATATCAGGGCACTTTTTCCTTCTGATTGCAATCCATTTTATGCTGGCTTTGGAAATAGAGATACTGATGAGATCAGCTACCTTAAAGTTGGAATCCCAAAAGGAAAAATCTTCATTATTAATCCAAAGGGAGAGGTTGCTGTGAACCGCCGTCATGACACAAAATCATATACTTCACTTCATGCCCTCGTGAATGGGATGTTCCCTCCAATGAACTCATCTGAGCAGCCTCGTTGTGTTAAGATGAAAGAGCAGAAAGGGATGGATGAAAGATTTGTGAAAGAGCAGGATACATTTTACCTGCTTCCTGCTTCAAACTCGGCTTCTCCCCTGCTTGATGCTGTGAAATCAGCTCCCTTATTCTGA 3480 0.425 MQAVGRLGSYISRGVYTVSGPFHPFGGAVDIVLVEQEDGSFKSSPWYVRFGKFQGVLKAKEKVVSISVNGVEANFHMYLDHKGEAFFLREVEAVEGESMIYPSFSGDETDSPTQDNKLLLNSKSCNYGSHKSNSVAKIDINNGNIVAGTNSNRSQMIGLAFGRRSIGGNNNFQGEFDNVGIKRVGSLECAEIAADLMEAKWSTNLAGDKPSRKASEKNKKSSSQRDNMENALNQLTLYEEACSHNEQEGICSKSDLEIPGGLSEEECENSSCLSTPDEVSKIFMVGESFSKEKAKVITGVSTSTDIAEDTEHDRKVKEVISDSTRCDLRAACLELEAHIEKKLSGEDVSSVSVKPGYGISEEEISADGIQSLVNGVTSESSMGGMDCSSERTHEVPYPAIGRCGDVHVHAEVLQATNFLLPEVTKIVEVGKNANLGMPKMKVSQQTDCSLPRVSKFNVVDVEDPPTLPKPRRVNLDLGLCSAEKVESNCVVTTSSYGSQGNQTLEEKNLKDEVVSSTLTSLESVSDCVLRRATSRLPSASSEDEHFFFSDFDESRFSDQFDCSISPEYVDEEDQVSYLDGIEKVNQLIDRNYSLHLSPENCATGNQLTDLENLRVTSSPTVIPKNEDPGKEVGPQTKSLPGMYSYSNALGQHDLCYPLSHSLDSKTQFLEKPLLGKDDLKCLKSAEGKENQLLPEKPGAKDCHGSGMGVDAASKAFGAEKLDFDKFTSLGPELVRDNMLFVRLVIIVLGMVSLGRQQIFKPKGLMPVEKNLTGDSSALSPSPGRNWRLWPFSFRRSTSREAMVPASYAKNTNASESTIETDANKNELKPNPLKNNARANTPTSEQLASLNLKEGRNTVTFTFSTGMLGKQQVDAQIYLWKWNTRIVISDVDGTITKFLLSLSWYFSTPITQSLEGNNHGSYKKFNLWFKGILSGVLLEVISWSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAISQAYHTRQFLINLKQDGKVLPDGPVVISPDGLFPSLFREVIRRTPHEFKIACLEDIRALFPSDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPKGEVAVNRRHDTKSYTSLHALVNGMFPPMNSSEQPRCVKMKEQKGMDERFVKEQDTFYLLPASNSASPLLDAVKSAPLF 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0324 1159 PANTHER LIPIN 1 896 IPR026058 -
Glsi10g0324 1159 Pfam LNS2 (Lipin/Ned1/Smp2) 940 1107 IPR013209 -
Glsi10g0324 1159 Pfam LNS2 (Lipin/Ned1/Smp2) 840 896 IPR013209 -
Glsi10g0324 1159 SUPERFAMILY HAD-like 877 1073 IPR036412 -
Glsi10g0324 1159 MobiDBLite consensus disorder prediction 205 227 - -
Glsi10g0324 1159 MobiDBLite consensus disorder prediction 210 224 - -
Glsi10g0324 1159 SMART lns2 939 1087 IPR031315 -
Glsi10g0324 1159 Coils Coil 228 248 - -
Glsi10g0324 1159 MobiDBLite consensus disorder prediction 813 841 - -
Glsi10g0324 1159 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0324 Glsi-ChrGlsi10 2103210 2111419 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0324 10 2103210 2111419 Glsi08g1884 08 13342891 13350343 CCT
Glsi10g0324 10 2103210 2111419 Glsi10g0324 10 2103210 2111419 ECH