Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1884 ATGGAGAGGCTGGGCGGCTATCTTACTCGGGGCGTGTACACTGTTTCCGGCCCTTTTCATCCTTTTGGTGGCGCTGTGGATATTGTTGTTGTTGAGCAGCAAGATGGGAGCTTCAAGTCGTCGCCTTGGTACGTCCGATTTGGGAAATTTCAAGGGGTTTTAAAGGCAAAGGAAAAGGTGGTCAATATTAGTGTTAATGGAGCAGAAGCTAATTTCAATATGTATTTGGATCATAAAGGGGAAGCTTTCTTTCTCAGGGAGGTGGATGCGGAAGATGGAGAATCTATAATGTATCCATCATCTTCTGGCGATGAGACAGATAGCCGACCCCAGGATAATAAGCACCTTTTGAAGTCGAAAAGTAGTAAGTTTGATCCAGACAATTCAAATTCAGTGGCTCAGATTGATATAAACAATGGTCAGCTTTTGGCCAGGACTAATTCTCGCCGATCGCGGGTACTTGGTTTTGTATTTGGGCGAAGGTACAAGAATGGCGACAATAATATTCATGGGGAAGTAGATCTGCCTAGTCTAAACAGGGTCGATTCATTGGAGCGTGCTGAGATTGCAGCCAACCTGTTAGAGATGAAGTGGTCTACCAATCTTGCCGGTGATAAACCACCTCGCAAAGACAGGATAAAAAGTCGGGAGAGCTCGTCTCACTCAAATAACAAGGAGAATGATTTGGACCAACTTAAATTAAATGATGAAGCTTGTTCCCGCTCTAAGCAAGAAGGCATCAGCTCCAAGTCCGAATTCGAAGGACTTGGCGAGGAAGAGGGTAAAAACCTGTCAAGCACCCCAGACAAAGTTGTTGAAAATTTTGTACTAGGGGAAAGCCTTACAGAAGGGGAAGCCAAAACGATAACGGAGGTATCCACCATAATTGATGCTAAGGACACTGAATGTAACACAAATGTGAAGGAAGTTGTATATGATAGCACCAGGTCTGATTTACAAGTAGCACCACGTCTGATTTCAGCAAATGGAGTTCAGTCGCTTGTCTATTGCAAAGCATCAGAGAGTTCAATGCTGGGCCTGGATTGTTCTAGTGAACAAACTCATGAGGTGCTGTACCTTGCTAGCGGAGGATGTCAACAAGTCCATGTCCATGACGAGGTCTTACATGCAACAAATGTACTGCTACCTGAGGTTACAAAAACTGAGGAAGTCCCGAAAAATGTTGATCTCAGGATGCCAGTAATGGAGATTTCTGATTTTCATTCTCAGAAAACCGATTGTTTTCATGCTGGTGTTAGTAATATGGCGGATGTTGAAGACCTCCCAACATTGCCAAATCCTCAGACTGTCAATTTGGATTTAGGACTTAGTTCAGTTGAGAATGTTCAGTCAAACTGTGTTGCTGTGACTTCTAGTTACAGCAGCTTGGATAACCTAGTCTTAAATGAGAATAATAATAAGGACAATGATGTCTCAAGCATCTTATCATCTCCACTGGGGTCTATTGGTGATTGTGTCATTAGCAAAGCAACAAGTAGACCACCATCAGCCATTTCAGAGGAAGAACACTTCCTTTTCAGTGACCCTGATGAATGTGGAATCACTGATCACTGTGAAGGGTCAATCTCCCCTGATTATGTAGATAAAGAAAATAATCTTTCTTATGTGGATAGCTTCGAAGAAGTGAACCAGCTAGTTGATGCAAATTACAATTCATATTCATCTCCAGAAAGCTCTAACACTCAAATAAAGGACCTTCAAAAGTTACGTCGGACATGCAGTCCCATAATTATCCCTAGAAATAAGGTTGACAGGGAGGAAGTTGAGCTTCAGACAGTATCCTTGCCTGATATGTCTTCTCACAGTAACATCCTGGGTAAACATGGTGTATGTTATCCTAAAAGTCAATCACTAGACTCAAAGTCCAAATCCTTCAAGTGGACTTTTCCTGACAAAGATTACTTGAAACATCTGAAATCAGATGGAGACAACGAAAACCAGTTCTTACAAGAGCAGCCCGGTGACAAGGAGAACCACAGTTCAGGGGATTTCAAGAGTACTGTTTTGAATCCTCCCATTGTTGGAGACCCTTCAAGACTCAACCCTTCTCCTGGTGGAAACTGGAGACTTTGGCCTTTCTCCTTCAGGAGATCAAGATCTGGAAAGGCTATGCTGCCTGCTCCAAGTGATGCCAAAACTACTAATTCTGGTAATGTTTCAGAGAGTATAATAATCAGTTATGCAGACAAAAATGAGCTCAAGCCCAATCTAAAGAAAAAGAAGGTCAGGGCAAAGACTCCCACATCTGAACAGCTGGCATCCTTGAATCTTAAGGAGGGGAGGAACACAGTAACCTTCACTTTCTCTACTGCTATGCTGGGGAAGCAGCAGGTTGATGCCCAAATATATTTGTGGAAATGGAACACTCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAGGTCAGATGTTCTAGGACAGTTCATGCCTTTGGTTGGAATAGACTGGTCACAGACAGGGGTTGCGCATTTATTCTCAGCTATCAAGGAAAATGGTTACCAACTGCTTTTTCTTAGTGCTCGGTCAATTTCTCAGGCATATAACACTAGACAATTCCTAACCAACCTTAAGCAGAATGGGAAAGTTTTACCGGATGGTCCTGTTGTTATTTCCCCTGATGGACTTTTTCCCTCTCTATATCGAGAAGATGCAGACCACCCGGTTCTGGTTGCCAAGCTTTTGAGTTTTGACAACAGGATTAAGAGATGGGATGGCTTTAATGGCATGATTATCAGGAGGGCTCCTCATGAATTTAAAATTGCATGCTTAGAGGACATCAGGGCACTATTTCCTTCTGATTGCAATCCATTCTACGCTGGTTTTGGAAATAGGGATACTGATGAAATCAGCTACATTAAGATCGGAATACCAAAAGGAAAAATCTTTATTATTAATCCAAAGGGAGAGGTTGCTGTAAACCGTCGTCTTGATACAAAATCATATACTTCTCTCCATGCTCTCGTAAATGGAATGTTTCCCCCTATGAACTCTATGAACTCATCTGAGCAGGAGGATTTTAATTCGTGGAATTTCTGGAAGCTACCTCCTGTTATGGATATTTGA 3087 0.424 MERLGGYLTRGVYTVSGPFHPFGGAVDIVVVEQQDGSFKSSPWYVRFGKFQGVLKAKEKVVNISVNGAEANFNMYLDHKGEAFFLREVDAEDGESIMYPSSSGDETDSRPQDNKHLLKSKSSKFDPDNSNSVAQIDINNGQLLARTNSRRSRVLGFVFGRRYKNGDNNIHGEVDLPSLNRVDSLERAEIAANLLEMKWSTNLAGDKPPRKDRIKSRESSSHSNNKENDLDQLKLNDEACSRSKQEGISSKSEFEGLGEEEGKNLSSTPDKVVENFVLGESLTEGEAKTITEVSTIIDAKDTECNTNVKEVVYDSTRSDLQVAPRLISANGVQSLVYCKASESSMLGLDCSSEQTHEVLYLASGGCQQVHVHDEVLHATNVLLPEVTKTEEVPKNVDLRMPVMEISDFHSQKTDCFHAGVSNMADVEDLPTLPNPQTVNLDLGLSSVENVQSNCVAVTSSYSSLDNLVLNENNNKDNDVSSILSSPLGSIGDCVISKATSRPPSAISEEEHFLFSDPDECGITDHCEGSISPDYVDKENNLSYVDSFEEVNQLVDANYNSYSSPESSNTQIKDLQKLRRTCSPIIIPRNKVDREEVELQTVSLPDMSSHSNILGKHGVCYPKSQSLDSKSKSFKWTFPDKDYLKHLKSDGDNENQFLQEQPGDKENHSSGDFKSTVLNPPIVGDPSRLNPSPGGNWRLWPFSFRRSRSGKAMLPAPSDAKTTNSGNVSESIIISYADKNELKPNLKKKKVRAKTPTSEQLASLNLKEGRNTVTFTFSTAMLGKQQVDAQIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYNTRQFLTNLKQNGKVLPDGPVVISPDGLFPSLYREDADHPVLVAKLLSFDNRIKRWDGFNGMIIRRAPHEFKIACLEDIRALFPSDCNPFYAGFGNRDTDEISYIKIGIPKGKIFIINPKGEVAVNRRLDTKSYTSLHALVNGMFPPMNSMNSSEQEDFNSWNFWKLPPVMDI 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1884 1028 MobiDBLite consensus disorder prediction 204 240 - -
Glsi08g1884 1028 MobiDBLite consensus disorder prediction 201 266 - -
Glsi08g1884 1028 MobiDBLite consensus disorder prediction 95 132 - -
Glsi08g1884 1028 MobiDBLite consensus disorder prediction 651 669 - -
Glsi08g1884 1028 MobiDBLite consensus disorder prediction 107 122 - -
Glsi08g1884 1028 Pfam lipin, N-terminal conserved region 9 93 IPR007651 -
Glsi08g1884 1028 SUPERFAMILY HAD-like 790 967 IPR036412 -
Glsi08g1884 1028 PANTHER LIPIN 2 890 IPR026058 -
Glsi08g1884 1028 Pfam LNS2 (Lipin/Ned1/Smp2) 753 1001 IPR013209 -
Glsi08g1884 1028 MobiDBLite consensus disorder prediction 252 266 - -
Glsi08g1884 1028 MobiDBLite consensus disorder prediction 651 688 - -
Glsi08g1884 1028 SMART lns2 798 981 IPR031315 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1884 Glsi-ChrGlsi08 13342891 13350343 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0324 10 2103210 2111419 Glsi08g1884 08 13342891 13350343 CCT
Glsi08g1884 08 13342891 13350343 Glsi08g1884 08 13342891 13350343 ECH