Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0302 ATGATAAACTCAAGAGCTTCATTTGGTATATCTGGAAAAGATGAATACCAGAGTCCTGCAGCCTATGAAAGCTCCAATGACACACGAAAAAAGATGCAGGGCAGCTTGAGAGAGGGAGCAGCACAAGTAAATAAAGGTGGAAAAGACTCGAGCAGAGATAGAAAGTTGGCTTTGCAACAAGATGTTGGTAAGTTGAAGAAGCAGCTCAGGAATGAAGAGAACATCCACAGGACACTGGAGAGGGCTTTAAACAGGCCTTTGGGAGCTCTCCCTCGTCTTCCTCCTTATCTCCCTCCTTACATACTAGCGCTGCTAGCCGAAGTGGCAGTACTGGAAGAGGAAATTGTTAGGCTTGAAGAGCAGGTCGTACATTTCAGGCAGGACTTGTACCAGGAAGCTGTCTACATGTCATCGTCTAGGAGAAGAATGGAGCATTCAGCTCATTTAAACAACGCAAATCCAATTGAAGGTCCCAAACTTGATAAATTGAAGTGTTTTTCCCAAACATCTGCAACTGGGTCTACGACAACAGTCCCTGAGGATAGACAAGGAAAAGAGAATCAGTCCTGTACTAATTCTTCCAAGACAAAAACTCCAATTAAGAAACTTCCCATTGACAATAAATCATCAGGGCAGAAATGTCGGGGTCCTCTAAAGAGGCAGCTAGAACCAAGGTGGAACGACCAGCCAATTGCAGAAGTAAGAAATCCGAGTCCGCACCAAAAACCACCAGGAGATTATAGCCCAAATATAATATCCGAAAATATTGTCAAGTGCTTAACAAGCATTCTCTTGCGAATGAGTTCAGTGAAGAATATCGGTGCTGCAGATGACATGGCATCCGTAAGGGCTTTGAAAACTCCAAACTGTGTTGAAAGAACAGAATTTTGGGATCCTTATGATATTTGTTTGGAATTTGGAGAGAGGGACATTGGTCCATACAAGCAATTATGTGCAATTGAAGCTAAATCTTTCAATCCAAAACGGACAGCAAATTCTCAGTTTTTACTGTGCCGATTGAAACTTCTTCTCCGGAAACTTGCCTCTGTGAGCTTAGAGAACCTCAACCATCAGGAGAAGCTTGCGTTCTGGATCAACATTTATAACTCGTGCATGATGAATGCATTCATTGAGAACGGCATCCCAGAGAGCCCCGAAATGGTTGTTGCGCTGATGCGGAAGGCAACAATAAATGTGAGCGGATACCTGCTAAGTGCGACAACAATAGAACATTGCATCCTAAGGCTTCCTTATCACTGCAAATTGAAATTTTCCAAGGGAGCCAAGAATCATGAAATGCAAGCAAGAAGCATATTTGGACTGGAATTGTCAGAACCCCTAGTCACATTTGCACTCTCGTGTGGGACTTGGTCCTCTCCTGCTGTGAGAGTTTACTCGGCATCCCAGGTTGAGAACGAACTGGAAGTTGCAAAAAGAGAGTATTTACAGGCAGCAGTTGGAATTTCAACATACAAGTTTGCTATCCCAAAACTGCTGAATTGGTATTTACTGGACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATCTGCCTCCAGTTACCGAGTGAACTAGGGAAGGAAGCCATTAAGTTCCTTGAGAAAAGAAAAACCCAGCCCCTCTCCCAATTTGTACAAATTATGCCTTATGAGTTCAGTTTTAGATACCTGCTATGCACGTAA 1683 0.432 MINSRASFGISGKDEYQSPAAYESSNDTRKKMQGSLREGAAQVNKGGKDSSRDRKLALQQDVGKLKKQLRNEENIHRTLERALNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSRRRMEHSAHLNNANPIEGPKLDKLKCFSQTSATGSTTTVPEDRQGKENQSCTNSSKTKTPIKKLPIDNKSSGQKCRGPLKRQLEPRWNDQPIAEVRNPSPHQKPPGDYSPNIISENIVKCLTSILLRMSSVKNIGAADDMASVRALKTPNCVERTEFWDPYDICLEFGERDIGPYKQLCAIEAKSFNPKRTANSQFLLCRLKLLLRKLASVSLENLNHQEKLAFWINIYNSCMMNAFIENGIPESPEMVVALMRKATINVSGYLLSATTIEHCILRLPYHCKLKFSKGAKNHEMQARSIFGLELSEPLVTFALSCGTWSSPAVRVYSASQVENELEVAKREYLQAAVGISTYKFAIPKLLNWYLLDFAKDLESLLDWICLQLPSELGKEAIKFLEKRKTQPLSQFVQIMPYEFSFRYLLCT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0302 560 Pfam Protein of unknown function, DUF547 353 482 IPR006869 -
Glsi10g0302 560 MobiDBLite consensus disorder prediction 1 54 - -
Glsi10g0302 560 MobiDBLite consensus disorder prediction 171 205 - -
Glsi10g0302 560 Coils Coil 55 82 - -
Glsi10g0302 560 MobiDBLite consensus disorder prediction 171 249 - -
Glsi10g0302 560 Coils Coil 101 128 - -
Glsi10g0302 560 PANTHER EXPRESSED PROTEIN 42 559 - -
Glsi10g0302 560 Pfam Leucine-zipper of ternary complex factor MIP1 51 132 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0302 Glsi-ChrGlsi10 1979061 1982382 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0302 10 1979061 1982382 Glsi08g1899 08 13464390 13467540 CCT
Glsi10g0302 10 1979061 1982382 Glsi10g0302 10 1979061 1982382 ECH