Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1899 ATGCTGTATATGCGATTTGTGTATAAAGTTGACAGTTGGGTTTTAAGTGGTGGCTGCAGATTTAGTAGAGGTGGAAAAGATGAACACCAGAGCCAAGCCTATGCTGCAGCCCATCCCACATGGAAAAGTAATTATAAGTTGCCTTTCTTTTTTATAGTCAGAACAGGGTGGATTCTAACCTCTTTGGCCTTGAATGAAAAGGCAGAGATGCAGGGAAGCTTGCGAGAGGGCACTGTTAATGCAGCTAAAGGTGGAAAAGCATCGAGGAGAGATAGAATATTAGCTTTGCAACGAGATATTGATAAGCTGAAGAAGAAGCTTAGGCATGAAGAGGACATCCACAGGGCATTGGACAGAGCTTTTAACAGACCTTTGGGAGCTCTGCCTCGTCTTCCTCCTTATCTCCCTCCCTACATACTAGGGCTTCTGGCTGAAGTAGCAGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGCAGGTCGTGCATTTCAGGCAGGACTTGTACCAGGAAGCTGTCTACTTGTCATCCTCGAAGAGGAGGATGGAGCATTCAGCTGATATTAACAATACAAATCCAATTGAAAGCCCCAAACTGGCTAAATTGAAGTCTCTTCCTCACACATCTGCAACTAGGCCTACAACAAAATTCCCAGAGGATTGGCAAGGTAAAGAGAATCAATCTTGTACTAATGCTTCCAAGAGGAGCAAGCAGTCCTCATGTAAATCCCAAACGACTAAAAGTCAAATTAAGAAACCTCCAACTGCCAATAAATCAGTGCAGAAACCTCGGGATCCTCGTAAGAGGCAGCAAGAACTTAAGGTGAACGACCAATCAATTGCAGAAGTAAGAAATCCTAGTTCATGTGAAAACCCACCGGGAGGTGACAGCCCAAATATTATTTCCGAAAATATTTTGAAGTGCTTATCTACCATCCTCATTAGAATGAGTTCAGTCAAGTGTCCTTGTCCTGCTGATGACATGCCATCCTTACGGGCTCTGAAAAATCGAAGCTGTATCGAAGAAACAGAGTTTTGGGATCCTTATGGTGTCAGTTTGGAATTTGGAAAGAGGGATATTGGTCCATACAAGCAACTATGTGCAGTTGAAGCTAAATCTTTCAATCCAAAACGAACTGCAAATTGTTTGATTTTACTGCGTAGATTGAAAATTCTTTTTGGAAAACTTGCCTCTGTGAACTTGGAGAACCTCAACCATCAGGAGAAACTTGCATTCTGGATCAACGTCTATAACTCTTGTATGATGAATGCGTTCATAGAGAATGGCATTGCCGAGAGTCCTGAAATGGTTGTTGCACTGATGCGGAAGGCAACAATAAATGTGGGCGGACACTTGCTAAGTGCAACAACCATAGAACATTTCATCCTAAGACTTCCTTATCACTGGAAATTTACAATTACAAAGGGAGCAAAAAATCATGAAATGACAGCAAGAAGCATATTTGGACTGGAATTGTCAGAACCTCTGGTGACATTTGCACTCTCCTGTGGAACTTGGTCCTCTCCTGCAGTGAGAGTTTACACGGCATCCCAGGTTGAGAACCAACTGGAAGTTGCAAAAAGGGAGTACTTACAGGCTGCAATTGGTATTTCAACATCCAAGTTTGCTATCCCAAAGTTGCTGGATTGGTATTTACTGGACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATCTGCCTCCAGTTACCAAGTGAACTAGGGAAAGAAGCCCTTAAATTCCTCGAGAAAAGAAAAACCGAGCCTCTCTCACAATTTGTACAAATTATGCCATATGAGTTCAGTTTTAGATACCTGATATGCACATAA 1827 0.4231 MLYMRFVYKVDSWVLSGGCRFSRGGKDEHQSQAYAAAHPTWKSNYKLPFFFIVRTGWILTSLALNEKAEMQGSLREGTVNAAKGGKASRRDRILALQRDIDKLKKKLRHEEDIHRALDRAFNRPLGALPRLPPYLPPYILGLLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYLSSSKRRMEHSADINNTNPIESPKLAKLKSLPHTSATRPTTKFPEDWQGKENQSCTNASKRSKQSSCKSQTTKSQIKKPPTANKSVQKPRDPRKRQQELKVNDQSIAEVRNPSSCENPPGGDSPNIISENILKCLSTILIRMSSVKCPCPADDMPSLRALKNRSCIEETEFWDPYGVSLEFGKRDIGPYKQLCAVEAKSFNPKRTANCLILLRRLKILFGKLASVNLENLNHQEKLAFWINVYNSCMMNAFIENGIAESPEMVVALMRKATINVGGHLLSATTIEHFILRLPYHWKFTITKGAKNHEMTARSIFGLELSEPLVTFALSCGTWSSPAVRVYTASQVENQLEVAKREYLQAAIGISTSKFAIPKLLDWYLLDFAKDLESLLDWICLQLPSELGKEALKFLEKRKTEPLSQFVQIMPYEFSFRYLICT 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1899 608 Pfam Leucine-zipper of ternary complex factor MIP1 90 170 IPR025757 -
Glsi08g1899 608 Coils Coil 86 120 - -
Glsi08g1899 608 MobiDBLite consensus disorder prediction 275 297 - -
Glsi08g1899 608 MobiDBLite consensus disorder prediction 260 274 - -
Glsi08g1899 608 PANTHER EXPRESSED PROTEIN 82 606 - -
Glsi08g1899 608 Pfam Protein of unknown function, DUF547 401 530 IPR006869 -
Glsi08g1899 608 Coils Coil 139 166 - -
Glsi08g1899 608 MobiDBLite consensus disorder prediction 178 297 - -
Glsi08g1899 608 MobiDBLite consensus disorder prediction 206 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1899 Glsi-ChrGlsi08 13464390 13467540 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0302 10 1979061 1982382 Glsi08g1899 08 13464390 13467540 CCT
Glsi08g1899 08 13464390 13467540 Glsi09g0514 09 3540661 3543992 CCT
Glsi08g1899 08 13464390 13467540 Glsi08g1899 08 13464390 13467540 ECH