Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1062 ATGGCCGGGACATTAAAGAAGTGCATGATGCTGTGTTGCACTAGCAAGATTGTGTCGTTATCGGTGAGAGAGGTCGTCTCTGTTCCCTTTTTGTGGCCTCTACCTCCTCACAACTACACGGTTCCTACCAATTCAGAATCTCTCTCTCTCTCTGTGTCTAGAAAAAAGAAGGAAGAAATGGCAGGAGAGTCATACGAGGAGGCCATTGCTGGGCTGACGAAGCTTATAAGTCAGAAAGCTGACCTCGGGGACATCGCCGCAGCGAAGATCAAGCAGCTAGTCGCCGAGTTAGAAGCTGCCGGTTCGAAGCCGTTTAACCCGGACGAGAGGATCCGAACCGGGTTCGCTCACTTCAAGAAAGAGAAATTCGAGAAGAATCCAGATTTGTATGGTGAACTTGCCAAAGGCCAGAGCCCTAAGTTTCTGGTATTTGCATGCTCAGACTCGAGAGTTTGCCCATCTCATGTCCTGAATTTCCAACCGGGTGAGGCTTTTGTGGTCAGAAACATCGCCAGCATGGTTCCACCCTATGACAAGAAAAAGTATTCAGGAGCAGGGGCAGCCATTGAATATGCAGTCTTACATTTGAAGGTGGAGAATATAGTGGTCATTGGACACAGCTGCTGTGGAGGTATAAAGGGGTTAATGTCTATCCCAGATGATGGGACCACTGCAAGTGATTTCATAGAGCAATGGGTTCAAATTTGTCACCCAGCAAAGTCTAAGGTTAAAGCAGAAACGAATAACTTAAGTTTCTCGGAGCAGTGTACTAACTGCGAGAAGGAAGCAGTGAATGTATCGCTTTTTAATCTGTTGACTTATCCATTTGTGAGAGAAGGGGTTGTGAAGAAAACTCTGGCTCTGAAAGGTGCACGTTACGATTTTGTTAATGGCACCTTTGAGCTCTGGGATCTCGACTTCAAAATTTCACCTTTTTTATCCCTTAATTAA 951 0.4595 MAGTLKKCMMLCCTSKIVSLSVREVVSVPFLWPLPPHNYTVPTNSESLSLSVSRKKKEEMAGESYEEAIAGLTKLISQKADLGDIAAAKIKQLVAELEAAGSKPFNPDERIRTGFAHFKKEKFEKNPDLYGELAKGQSPKFLVFACSDSRVCPSHVLNFQPGEAFVVRNIASMVPPYDKKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICHPAKSKVKAETNNLSFSEQCTNCEKEAVNVSLFNLLTYPFVREGVVKKTLALKGARYDFVNGTFELWDLDFKISPFLSLN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1062 316 Gene3D Carbonic anhydrase 100 315 IPR036874 GO:0004089|GO:0008270
Glsi09g1062 316 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 190 210 IPR015892 GO:0004089|GO:0008270|GO:0015976
Glsi09g1062 316 SUPERFAMILY beta-carbonic anhydrase, cab 109 311 IPR036874 GO:0004089|GO:0008270
Glsi09g1062 316 Pfam Carbonic anhydrase 142 299 IPR001765 GO:0004089|GO:0008270
Glsi09g1062 316 CDD beta_CA_cladeB 114 303 IPR045066 GO:0004089|GO:0008270
Glsi09g1062 316 SMART Pro_CA_2 134 304 IPR001765 GO:0004089|GO:0008270
Glsi09g1062 316 FunFam Carbonic anhydrase 96 315 - -
Glsi09g1062 316 PANTHER CARBONIC ANHYDRASE 67 306 IPR001765 GO:0004089|GO:0008270
Glsi09g1062 316 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 146 153 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1062 Glsi-ChrGlsi09 7403162 7408315 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0858 05 58913789 58925057 Glsi09g1062 09 7403162 7408315 CCT