Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0739 ATGAAGGAGGTTATAATTGTTGCAGTTGCTTCAACACTCGGAAATCTGCTCATAGGATGGGATAGTTCAACCCTTGCAGGGGGAATGTCTTACATCAAGCAAGAATTCCACTTGGAAAGAGATCCCACAGTTGAAGGACTAATTGTATCCATGATGTTTTTGACCGGCACTTTTGTGACAATATTCTCTGGAAGCGCCAGTGACTTGTTTGGACGACGTTCGATGTTGATAATATCATCAGTTATGTATTTCTTCAGCGGCGTGGTAATGTTGTGGGCTCCTAATATTTATGTTATTTTGTTCTCAAGGATATTAAGTGGGGTAGCCATAGCCCTCGCCGTTACTCTCACTCCTCTTTACATATCTGAGATTTCTCCACCTGATATTAGAGGTCAACTGAACACTGTTACACAGTTCTCTTGTTCTCTTGGAATGTTTTTAGCCTACTGCATGGTGTTCTCCGTGTCCTTAATGGACTCGCCTAGTTGGAGAATGATGCTTGGCATTGTTTCTATTCCTGCCGTTGCTTATTTCCTTCTAACTGTCTTCTACCTACCTGAATCTCCACGATGGCTTGTCAGCAAAGGTCGAATTCGCGAGGCTAAACTGGTCTTGCAAAGAATACGCGGCACCGAGGATGTTTCAGGTGAGTTGGCATTGCTAGTTGAGGGTCTGAGCCCAGGGGGTGAAACCACGTCCATAGAAGAATACATAGTAGCCCCAGCCGACGATCTCAATGTTGGCCCGCAGGAAGGAGGGAAAGATTATATAAAGTTATATGGACCCAATGAGGGAGTTTCAATGGTGGCTCAACCAGTAAATGGACAGGGAACCATGATCATGTCTCGCCAAGAGAGTTTTGCAACCCAGAGCGCTAGTTTTAAGGATCCTATTGTCACTCTCTTTGGAAGTTTGCACGACAATCTCTCTCAGAGTCCTGGAAGTGGAATGCTAATTCCCAAAGTGATCAGCGTCTCCAGCATGGGCGACGAAGACCAGCACTCCAACCCCACTGGTACCAGTGATAACCTTCATGCTCCATTACTCTCGCGTCAAGGTAGTGCTGACAGGTCCGGCATGAGAAGTAATAGCAATCTGGTTCAGGGGAATGCTGAAGAAACACCTAAGAATACAAGCATTGGTGGAGGTTGGCAATTGGTTTATAAATCGGCTGAGAGTGGGAAGAAGGAAGGAGGAGGGATCCAAAGAGTTTACTTGCATGCAGATTCTGCCACTCTGTCTCACCGAGCTGCTAATTCATTTGTTTCAACTTCTGGTTTCGATATTACTGTAGAAGGTGAAGCTTTTCCAGCCTCTGCACTGGTTAGCCAGTCAGTTCTTGGTACTAAGGATGTGTTGAAGATCATAAATCAACCAGAAGTAGCTGCAAAAGGTCCAGGTTGGAGAGGTCTGCTAGAACCAGGGGTCAAACGTGCATTAATTGTTGGAATAGGACTTCAAATTCTTCAGCAGGCTGCGGGCATAAATGGGTTTCTCTACTATGCACCCCAGGTTCTTGAGCAGGCAGGAGTAGGGGCTCTTTTGTCAAATTTGGGCATTAGTGCAAGATCTGCTTCTTTGCTCGTAAATGTTATTACAACTTTTTGTATGCTTCCTTGTATAGCTCTTTCCGTGAAGCTCATGGATATTGCTGGCCGAAGGTCAATAATGCTGTACACGTTGCCCATTTTGATAGCGTCTCTGGTACTCCTGGAGCTCCGGGACTACATGAACATCAATCCTGTCCTGAATGCAGCAATCACTGCTCTTAGTGTTGTGGTGTTCGAAAGCGTCTTCTGCATGGGGTTTGGTGTGATTCCAAACATCTTATGTGCAGAAATCTTCCCTACAAGTGTTCGTGGAATCTGCATTTCTATTTGTTGCCTTGCCTTTTGGATTTCAACCTTGATCCTCACTTCTACATTTCCTACCTTGCTTCAACTCCTAGGTCTTTCCGGTGTTTTTGGATTGTTTGTTGTTGGATGCATTGTTTCATGGGTATTTGTTTACTTGAAAGTTCCTGAAACAAAAGGGATGCCTTTGGAAGTCATTATTGAGTTTTTTGCTATTGGGGCAAAGCCTGGTACTGATTGA 2094 0.4475 MKEVIIVAVASTLGNLLIGWDSSTLAGGMSYIKQEFHLERDPTVEGLIVSMMFLTGTFVTIFSGSASDLFGRRSMLIISSVMYFFSGVVMLWAPNIYVILFSRILSGVAIALAVTLTPLYISEISPPDIRGQLNTVTQFSCSLGMFLAYCMVFSVSLMDSPSWRMMLGIVSIPAVAYFLLTVFYLPESPRWLVSKGRIREAKLVLQRIRGTEDVSGELALLVEGLSPGGETTSIEEYIVAPADDLNVGPQEGGKDYIKLYGPNEGVSMVAQPVNGQGTMIMSRQESFATQSASFKDPIVTLFGSLHDNLSQSPGSGMLIPKVISVSSMGDEDQHSNPTGTSDNLHAPLLSRQGSADRSGMRSNSNLVQGNAEETPKNTSIGGGWQLVYKSAESGKKEGGGIQRVYLHADSATLSHRAANSFVSTSGFDITVEGEAFPASALVSQSVLGTKDVLKIINQPEVAAKGPGWRGLLEPGVKRALIVGIGLQILQQAAGINGFLYYAPQVLEQAGVGALLSNLGISARSASLLVNVITTFCMLPCIALSVKLMDIAGRRSIMLYTLPILIASLVLLELRDYMNINPVLNAAITALSVVVFESVFCMGFGVIPNILCAEIFPTSVRGICISICCLAFWISTLILTSTFPTLLQLLGLSGVFGLFVVGCIVSWVFVYLKVPETKGMPLEVIIEFFAIGAKPGTD 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0739 697 ProSitePatterns Sugar transport proteins signature 1. 544 560 IPR005829 GO:0016020|GO:0022857|GO:0055085
Glsi09g0739 697 PRINTS Sugar transporter signature 612 624 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi09g0739 697 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi09g0739 697 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi09g0739 697 PRINTS Sugar transporter signature 490 500 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi09g0739 697 PRINTS Sugar transporter signature 589 610 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi09g0739 697 Gene3D MFS general substrate transporter like domains 2 240 IPR036259 -
Glsi09g0739 697 Gene3D MFS general substrate transporter like domains 467 693 IPR036259 -
Glsi09g0739 697 MobiDBLite consensus disorder prediction 327 382 - -
Glsi09g0739 697 SUPERFAMILY MFS general substrate transporter 9 682 IPR036259 -
Glsi09g0739 697 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 4 689 - -
Glsi09g0739 697 FunFam Monosaccharide-sensing protein 3 2 249 - -
Glsi09g0739 697 MobiDBLite consensus disorder prediction 328 348 - -
Glsi09g0739 697 MobiDBLite consensus disorder prediction 355 382 - -
Glsi09g0739 697 Pfam Sugar (and other) transporter 466 685 IPR005828 GO:0016020|GO:0022857|GO:0055085
Glsi09g0739 697 Pfam Sugar (and other) transporter 8 225 IPR005828 GO:0016020|GO:0022857|GO:0055085
Glsi09g0739 697 FunFam Monosaccharide-sensing protein 3 444 690 - -
Glsi09g0739 697 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 677 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0739 Glsi-ChrGlsi09 5058717 5061723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0739 51 693 Organic Solute Cotransporters AT3G51490 52.367 0.0 671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2112 08 14760158 14766507 Glsi09g0739 09 5058717 5061723 CCT
Glsi09g0739 09 5058717 5061723 Glsi09g0739 09 5058717 5061723 ECH
Glsi09g0739 09 5058717 5061723 Glsi08g2112 08 14760158 14766507 ECH