Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2112 ATGAAAGGAGCCGTGCTAGTGGCTATTGCGGCTTCCATTGGGAGTTTTCTGCAAGGATGGGATAATGCTACTATTGCTGGTGCCATTGTTTACATAAAGAAGGACCTTGCTTTGCAAGCATCTATAGAAGGACTTGTGGTGGCCATGTCCCTCATTGGAGCAATAATAATCACAACATGCTCTGGTCCCATATCAGATTGGCTCGGTCGGCGTCCAATGTTGATAATCTCATCTATACTTTATTTTTTGAGTGGTTTGCTGATGTTTTGGTCCCCTAATGTGTACATGTTATGCATAGCAAGGCTACTAGATGGATTTGGGATTGGTCTGGCTGTTACTCTTGTCCCAGTCTACATCTCTGAGACTGCTCCATCTGATATAAGGGGATCATTAAATACACTTCCACAGTTCACTGGTTCAGGAGGCATGTTTTTATCATATTGTATGGTTTTTGGGATGTCATTGACTTCCTCGCCTAGCTGGAGACTAATGCTTGGGGTTCTTTCTGTCCCCTCTCTCATCTATATTGTATTAACAATATTTTTCTTGCCTGAGTCTCCTCGGTGGCTAGTGAGTAAAGGAAAAATGCTTGAGGCTAAAAAAATTCTCCAAAGATTACGAGGCAGGGAAGACGTTTCAGGTGAGATGGCATTACTGGTTGAAGGCCTTGGGATTGGAGGTGAAACATCGATAGAAGAGTATATTATAGGCCCTGCTGATGAAGTAGCTGATGGCCAGGAACCAACAACAGAGAAAGATAAAATTCGGTTATATGGATCCGAAGCTGGCCTCTCTTGGGTTGCAAAACCTGTCATTGGACACAGTTCTCTGGGTCTTGCATCACGCCAGGGAAGCATGGTCAACCAAAGCATGCCTCTCATGGATCCTCTTGTGACTCTTTTTGGTAGCGTACATGAGAAGCACCCTGAGACAGGAAGCTTGATTTTTCCAAATTTTGGGAGCATGTTCAGCGCAGCTGAGCCTCAAGTTAAACATGAACAGTGGGATGAAGAGAGCTTACAAAGAGAAGGTGAAGACTACACATCAGAAGTTGCTGCTGGAGACTCTGATGACAATTTGCATAGTCCTTTAATCTCACGTCAAACAACAAGCATTGAAAAACAGACACTTCCTCCTCCTTCCCATGGCAGTATCCTAAGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGATCAGGCGAGCAAGTTGATAGTACAGGCATTGGTGGTGGCTGGCAGCTGGCATGGAAATGGTCTGAGAGAGAAGGTGAGGATGGAAAAAAGCAAGGTGGATTTAAAAGGATTTATCTGCACCAGGAGGGAGTTCCTGGATCTCGACGTGGATCCCTTGGATCAATTCCTGGTGGTGAAGTTCCCGGTGAAGGTGAATTTGTCCAGGCTTCTGCCTTGGTAAGTCAGCCTGCTCTTTACTCCAAGGAACTTATTGATCAGCAACCAGTTGGGCCTGCCATGGTTCACCCATCTGAGACTGCTTCAAAAGGACCAATTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGTTTGTTGGGATTGGAATACAATTACTTCAGCAGTTTTCAGGAATAAATGGGGTTCTATATTACACTCCTCAAATCCTTGAAGAGGCAGGTGTTGGAGTTCTTCTTGCAGATATAGGCATTAGTTCAGAATCTTCATCATTCCTTATTAGTGCATTCACAACCTTTTTGATGCTTCCATCTATAGGTTTAGCCATGAGGCTCATGGATATCTCAGGCAGAAGGCGGTTACTACTCACCACAATTCCTGTGCTGATTGTGTCACTCGTTATTTTGGTCGTTGGAAACATAGCCGACTTTGGCACTGTAGTGCATGCAGTAATATCAACTGTATGCGTAGTGGTGTATTTCTGCTTCTTTGTCATGGGCTATGGACCAATTCCAAACATACTTTGCTCTGAGATTTTCCCCACTAGGGTCCGGGGGCTCTGCATTGCTATCTGTGCTTTAGTGTTCTGGACTGGAGACATCATTGTCACTTACACACTGCCCGTGATGCTCAGCTCCTTTGGACTCGCTGGTGTCTTTGGAATTTACGCCATTGTGTGCTTCATCTCCTGGATATTTGTGTTTTTGAAGGTGCCAGAAACCAAGGGCATGCCCCTTGAAGTCATCACTGAATTCTTTGCTGTTGGTGCAAGACAAGCTGCTTCTGACAAGAAAGAGTGA 2214 0.4494 MKGAVLVAIAASIGSFLQGWDNATIAGAIVYIKKDLALQASIEGLVVAMSLIGAIIITTCSGPISDWLGRRPMLIISSILYFLSGLLMFWSPNVYMLCIARLLDGFGIGLAVTLVPVYISETAPSDIRGSLNTLPQFTGSGGMFLSYCMVFGMSLTSSPSWRLMLGVLSVPSLIYIVLTIFFLPESPRWLVSKGKMLEAKKILQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPADEVADGQEPTTEKDKIRLYGSEAGLSWVAKPVIGHSSLGLASRQGSMVNQSMPLMDPLVTLFGSVHEKHPETGSLIFPNFGSMFSAAEPQVKHEQWDEESLQREGEDYTSEVAAGDSDDNLHSPLISRQTTSIEKQTLPPPSHGSILSSMRRHSSLMQGSGEQVDSTGIGGGWQLAWKWSEREGEDGKKQGGFKRIYLHQEGVPGSRRGSLGSIPGGEVPGEGEFVQASALVSQPALYSKELIDQQPVGPAMVHPSETASKGPIWKALLEPGVKHALFVGIGIQLLQQFSGINGVLYYTPQILEEAGVGVLLADIGISSESSSFLISAFTTFLMLPSIGLAMRLMDISGRRRLLLTTIPVLIVSLVILVVGNIADFGTVVHAVISTVCVVVYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWTGDIIVTYTLPVMLSSFGLAGVFGIYAIVCFISWIFVFLKVPETKGMPLEVITEFFAVGARQAASDKKE 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2112 737 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016020|GO:0022857|GO:0055085
Glsi08g2112 737 Gene3D MFS general substrate transporter like domains 2 253 IPR036259 -
Glsi08g2112 737 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016020|GO:0022857|GO:0055085
Glsi08g2112 737 Pfam Sugar (and other) transporter 502 724 IPR005828 GO:0016020|GO:0022857|GO:0055085
Glsi08g2112 737 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 5 732 - -
Glsi08g2112 737 SUPERFAMILY MFS general substrate transporter 5 718 IPR036259 -
Glsi08g2112 737 Gene3D MFS general substrate transporter like domains 497 734 IPR036259 -
Glsi08g2112 737 MobiDBLite consensus disorder prediction 327 347 - -
Glsi08g2112 737 MobiDBLite consensus disorder prediction 330 347 - -
Glsi08g2112 737 FunFam Monosaccharide-sensing protein 2 477 726 - -
Glsi08g2112 737 FunFam monosaccharide-sensing protein 2 2 247 - -
Glsi08g2112 737 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi08g2112 737 PRINTS Sugar transporter signature 625 646 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi08g2112 737 PRINTS Sugar transporter signature 526 536 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi08g2112 737 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi08g2112 737 PRINTS Sugar transporter signature 648 660 IPR003663 GO:0016020|GO:0022857|GO:0055085
Glsi08g2112 737 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 713 IPR020846 GO:0022857
Glsi08g2112 737 ProSitePatterns Sugar transport proteins signature 2. 103 128 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2112 Glsi-ChrGlsi08 14760158 14766507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2112 1 737 Organic Solute Cotransporters AT4G35300 70.296 0.0 986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2112 08 14760158 14766507 Glsi09g0739 09 5058717 5061723 CCT
Glsi08g2112 08 14760158 14766507 Glsi08g2112 08 14760158 14766507 ECH
Glsi09g0739 09 5058717 5061723 Glsi08g2112 08 14760158 14766507 ECH