Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0591 ATGTCTGGACCTTTGTCTCCCAAGTCAGCTGGGTCTTTTAAGAAGAGAGCAATGACTGCCTCAAATAAATTCAGGAGTTCTTTGTCGAGAAAGGGTAGGAGATCTAGCAAGGTCATGTCTGTTGAACTTGAAATTGAGGATTTTCGTGATGCTGAAGAATTGGAAGCTGTTGAAAAGTTCCGTCAAGCTCTTATATTGGAGGAATTACTCCCTGCTAAGCACGATGATTATCATATGTTGCTCAGATTCTTGAAGGCCAGGAAATTTGATATGGAGAAAACAAAGCAAATGTGGTCTGACATGCTCCGGTGGAGGAAGGAATTTGGTGCTGACACAATTGTAGAGGTTTTTGATTTCAAGGAACGCAATGAAGTCTTACAATATTATCCCCAAGGGCATCATGGAGTAGATAAAGATGGACGACCTGTGTACATTGAGAGATTGGGCATGGTAGACAACACCAAGCTGATGCAAGTGACAACCATGGATCGCTATGTTAATTACCATGTACAGGAGTTTGAGAGGACATTTGATGTAAAGTTCCCTGCTTGTTCAATTGCTGCAAGGAGGCACATTGATCAAAGTACAACCATCCTGGATGTGCAAGGAGTGGGGCTTAAGAACTTCAACAAATCTGCTAGGGAGCTCGTTTCTCGCATTCAGAAGATTGACGGTGACAATTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCTGGTTCTGGATTCAGAATGTTATGGAGCACTGTGAAATCCTTCCTTGATCCTAAGACCACAGCAAAAATACATGTTCTTGGCAACAAGTATCAGAGCACTTTGCTTGAAATTATTGATGAAAGCGAGTTGCCAGAGTTTTTAGGAGGCACTTGTACCTGTGCTGATCAAGGAGGCTGTATGCGTTCTGATAGGGGCCCATGGAAGAATGAAGAAATATTGAGGATGGTTAAGAATGGTGATCATAAATGTTCAAGAAAAAGTGAGTCTCATGTCATGGAAGAGAAGACAATTTCTGAGACGGTGTCTGAGGAAATGCCTACCAGGGACCATATCAGTAACACACAAACGGCTCCTGTTTGTGATGAGGTCCCTTCTATTAAATCTCGCAAGTATGAAGATGTTGTCCTAGTGGCTGATAAAACAGCTTTGAAAAAAATTGAAGAGAATGACACATTGGCAGTATCAAAAGCTGGAGTGGATTCTTTCGCCATGATTGCTGATTCATTGAAGATTCATGAAAAAGTAAATTCCCAGATTTTCACTGGCGTCATGGCATTTGTTATGGGTATCGTTACCATGGTCAGAATGACACGAAACATGCCTAAGAAGCTCACTGATGCCAACTTCTACTCCAATACTGCTTCCTCTTTTGACAAGATGTATAAAGGACAGGCTCCTTCTGACCAACCTATGCCTTCCATCTCTGCTGAGGAGTTTATGGCTGTGCTGAAACGCATGACTGAGATAGAAGAGAAAATGATATCCATGAATATACCTGCTACCATGCCGCCTGAGAAGGAGGAAATGCTGAATGCTGCTATAAGCCGAGCCGATGCATTGGAGCAAGAACTTATGGAGACCAAGAAGGCTTTGGAGGCGTCACTCGCCAAACAAGAGGAGCTTTTAGCTTATATTGAGAAAAAGAAGAAGAAGAAAATGGTATGCTCTCCGTACTGTAACTTTGCTATACATTTGTCTGGTGAGGGAGATATTGTGGATGCGGACGATACGCCATAG 1737 0.4249 MSGPLSPKSAGSFKKRAMTASNKFRSSLSRKGRRSSKVMSVELEIEDFRDAEELEAVEKFRQALILEELLPAKHDDYHMLLRFLKARKFDMEKTKQMWSDMLRWRKEFGADTIVEVFDFKERNEVLQYYPQGHHGVDKDGRPVYIERLGMVDNTKLMQVTTMDRYVNYHVQEFERTFDVKFPACSIAARRHIDQSTTILDVQGVGLKNFNKSARELVSRIQKIDGDNYPETLNRMFIINAGSGFRMLWSTVKSFLDPKTTAKIHVLGNKYQSTLLEIIDESELPEFLGGTCTCADQGGCMRSDRGPWKNEEILRMVKNGDHKCSRKSESHVMEEKTISETVSEEMPTRDHISNTQTAPVCDEVPSIKSRKYEDVVLVADKTALKKIEENDTLAVSKAGVDSFAMIADSLKIHEKVNSQIFTGVMAFVMGIVTMVRMTRNMPKKLTDANFYSNTASSFDKMYKGQAPSDQPMPSISAEEFMAVLKRMTEIEEKMISMNIPATMPPEKEEMLNAAISRADALEQELMETKKALEASLAKQEELLAYIEKKKKKKMVCSPYCNFAIHLSGEGDIVDADDTP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0591 578 SUPERFAMILY CRAL/TRIO N-terminal domain 50 115 IPR036273 -
Glsi09g0591 578 Gene3D - 44 108 - -
Glsi09g0591 578 Pfam CRAL/TRIO domain 127 289 IPR001251 -
Glsi09g0591 578 SMART CRAL_TRIO_N_2 76 101 IPR011074 -
Glsi09g0591 578 PRINTS Cellular retinaldehyde-binding protein signature 248 267 - -
Glsi09g0591 578 PRINTS Cellular retinaldehyde-binding protein signature 281 290 - -
Glsi09g0591 578 PRINTS Cellular retinaldehyde-binding protein signature 79 101 - -
Glsi09g0591 578 MobiDBLite consensus disorder prediction 1 33 - -
Glsi09g0591 578 FunFam SEC14 cytosolic factor 109 321 - -
Glsi09g0591 578 Coils Coil 510 548 - -
Glsi09g0591 578 CDD SEC14 123 290 IPR001251 -
Glsi09g0591 578 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 121 295 IPR001251 -
Glsi09g0591 578 SMART sec14_4 121 292 IPR001251 -
Glsi09g0591 578 Pfam CRAL/TRIO, N-terminal domain 67 100 IPR011074 -
Glsi09g0591 578 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 8 549 - -
Glsi09g0591 578 SUPERFAMILY CRAL/TRIO domain 124 316 IPR036865 -
Glsi09g0591 578 Gene3D - 109 320 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0591 Glsi-ChrGlsi09 4089457 4093850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0591 55 286 Acyl Lipid Metabolism Gene Families AT5G47730 31.120 1.09e-22 97.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0591 09 4089457 4093850 Glsi09g0591 09 4089457 4093850 ECH
Glsi01g0194 01 1576965 1586352 Glsi09g0591 09 4089457 4093850 ECH