Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0541 ATGCAATCCGGCATTATATCAAAGCTGAATGCTACCATTTACTGTCGCTTTCAAGAAGCAATAACTCGGCAACAAGGGGTGCCATCATTATTATACAGAAATTCATCTCTGTTTCTTTCTTTGCTACATTCAACTTCATTTTTATCTGATGCCAGTCATTCTTCTTCAAGCCACATGCTTAAAAGAGAATCAATAACTGCTTCAATTTCCAAATCCGTTCTAGGAGATGTTTGTGTAGAAAACATAATCGCAAATTGTAGGAGTGCAAAAGCCTTCACAAAGCCTAGTGGTGTTTACTTCAATGACAGAACACGGAAAGGTTACCTAAGAGCTATTTTGAATATAAGAAGAAGAGATCCATTGAATGGTCCTCTTAATATTGGTTATTCCACATTTGATGCTAGTTCGAGTTTGCCTCATGGACCATTGCTGAAAATTTTCTCTACCACATTTTCTACTTGCTATTTAGCTCGGGCTGCACATGATGTCTCATTTGACAGCAGCACTTGTGACGAACAGCTTGCAAATTCCTCTCTTTCACCAGATCAAACTATTGTTGGCGGCAAGACCTTGAAGCTGTTTTCAGGATCTAGTTACCTACCACATCCCGATAAGGTGGAAACGGGTGGGGAAGATGCTCACTTTATTTGCACTCATGAACAAGCAATCGGTGTTGCAGATGGTGTTGGTGGTTGGGCGGAAGTTGGTGTTAATGCAGGACTGTTTGCCCGTGAACTTATGTTCAATTCAGTAAGAGCAATTCAAGAGGAACCAAAGGGTTCTATTGATCCAGCTAGGGTGCTAGAGAAGGCTCACTCAAGTACAAAGGCCAAGGGTTCATCAACAGCTTGTATCATTGCCCTTACTGATAAGGGACTACAAGCTATCAATCTGGGTGACAGTGGATTCGTTGTGGTTAGAAGTGGATGCACCATTTTCAGGTCTCCTTTTCAACAGCATGGCTTCAATATTACATATCAATTGGAGAGTGGCAATGGAGGTGATTTACCCAGCTCCGGTCAGGTTTTTACAATACCTGTTGAGCGAGGAGATGTCATCATTGCTGGAACAGATGGATTATTTGACAACTTGTACAGTAATGAGGTTACTGCAGTTGTTGTACATGCTGGAAGAACGGGACTAGAACCCCATGGAACTGCACAGAAGCTAGCAGCGCTGGCCCGTCAGAGAGCACAGGACAAAAATAGGCAGACTCCATTTTCTACTGCTGCTCAAGAAGCTGGTTTCCGTTATTATGGTGGCAAGCTTGACGACATTACTGTAGTTGTATCATACGTAACAACATAA 1308 0.4228 MQSGIISKLNATIYCRFQEAITRQQGVPSLLYRNSSLFLSLLHSTSFLSDASHSSSSHMLKRESITASISKSVLGDVCVENIIANCRSAKAFTKPSGVYFNDRTRKGYLRAILNIRRRDPLNGPLNIGYSTFDASSSLPHGPLLKIFSTTFSTCYLARAAHDVSFDSSTCDEQLANSSLSPDQTIVGGKTLKLFSGSSYLPHPDKVETGGEDAHFICTHEQAIGVADGVGGWAEVGVNAGLFARELMFNSVRAIQEEPKGSIDPARVLEKAHSSTKAKGSSTACIIALTDKGLQAINLGDSGFVVVRSGCTIFRSPFQQHGFNITYQLESGNGGDLPSSGQVFTIPVERGDVIIAGTDGLFDNLYSNEVTAVVVHAGRTGLEPHGTAQKLAALARQRAQDKNRQTPFSTAAQEAGFRYYGGKLDDITVVVSYVTT 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0541 435 FunFam 5-azacytidine resistance protein azr1 202 327 - -
Glsi09g0541 435 Pfam Stage II sporulation protein E (SpoIIE) 220 433 IPR001932 -
Glsi09g0541 435 PANTHER PROTEIN PHOSPHATASE 2C 172 434 IPR039123 -
Glsi09g0541 435 Gene3D - 204 327 IPR036457 -
Glsi09g0541 435 SUPERFAMILY PP2C-like 198 430 IPR036457 -
Glsi09g0541 435 Gene3D - 336 435 IPR036457 -
Glsi09g0541 435 SMART PP2C_SIG_2 201 433 IPR001932 -
Glsi09g0541 435 ProSiteProfiles PPM-type phosphatase domain profile. 197 433 IPR001932 -
Glsi09g0541 435 SMART PP2C_4 184 431 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0541 Glsi-ChrGlsi09 3742093 3744798 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1484 05 63478083 63481093 Glsi09g0541 09 3742093 3744798 CCT
Glsi09g0541 09 3742093 3744798 Glsi09g0541 09 3742093 3744798 ECH
Glsi09g0541 09 3742093 3744798 Glsi05g1484 05 63478083 63481093 ECH