Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1484 ATGCCTTCTGGCATTCTCTCAATACTGAATGCTACCTTTTACTATCGTTTTCGACAAGCAATAACTCGGCAACAAGGAGTGCCAAGATCGTTGTACAGAAATTCAGCTGTGTCTCTTTTCTCACTACATTCAACTTCATTTTTATTAGACACCACTCGTTGTTCTTCAACCCTCACGGTTAAAAGAAAATCAATGGCTGCTTCAACCTCCAAAGCTATCTTAGGAGATATTTATGTGGATGACATCGTCCCGAGTTGTACCAGTGCATCAGGCGTCACGAAGCACGCTGGTGTTTACTTCAAAGACAGAAGCCGTAAAGGTTGCTTGAGAGCTAGTGTGGGTATTAGAAGACCAGAACCGGCGAACGGTCATCTGAATTTTCGGTATTCCACTTTTGATGCTAATTGGAGGAAGCAGAACTCTAGCTTGATTCATGGACCATGGCTGAACAATTTCTCTATGACATCTCCTGCATGCTATTCAGCTGGGGCTGCACACAATGTCTCATGTGATGGCAGCACTCGTGATGACCAACTCGCTAGTTCTTCCATTTCTCCTGACCAAACTACCGTAGGTGGCAAGACCTTGAAGCTGTTTTCAGGATCATGTTACCTACCACATCCGGATAAGGAGAAGACAGGTGGAGAGGATGCTCATTTTATTTGCACAGATGAACAAGCAATTGGTGTAGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTATTAATGCAGGACTGTTTGCCCGTGAACTTATGTCCAATTCAGTAAAAGCGATTCAAGAGGAGCCAAAAGGTTTTATTGATCCTGTGAGGGTGTTAGAGAAGGCTCATTTAAGTACAAAGGCGAAGGGTTCATCAACAGCTTGTATCATTGCCCTTACTGATAAGGGCCTACATGCTATTAATTTGGGTGACAGCGGATTCATTGTGGTTAGAGAGGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGGCTTCAATTTTACATATCAGTTGGAGAGTGGCAACGGGGGTGATCTACCCAGCTCTGGTGAGGTTTTTACAATACCTGTTGCCTCAGGAGATGTTGTCATTGCTGGAACAGATGGATTATTTGACAACTTGTACAACAATGAGGTTACTGCAGTGGTCGTACATGCAGTTAGAGCTGGACTAGAACCCCAAGTAACTGCTCAGAAGATAGCAGCATTGGCTCGTCAGCGTGCTCTGGACCGGAATAGGCAGACACCATTTTCTACTGCTGCTCAAGAGGCTGGGTTCCGTTATTATGGTGGCAAGCTTGATGACATAACAGTTGTTATATCATACATAACAAAGGTCAATTAG 1329 0.4462 MPSGILSILNATFYYRFRQAITRQQGVPRSLYRNSAVSLFSLHSTSFLLDTTRCSSTLTVKRKSMAASTSKAILGDIYVDDIVPSCTSASGVTKHAGVYFKDRSRKGCLRASVGIRRPEPANGHLNFRYSTFDANWRKQNSSLIHGPWLNNFSMTSPACYSAGAAHNVSCDGSTRDDQLASSSISPDQTTVGGKTLKLFSGSCYLPHPDKEKTGGEDAHFICTDEQAIGVADGVGGWADVGINAGLFARELMSNSVKAIQEEPKGFIDPVRVLEKAHLSTKAKGSSTACIIALTDKGLHAINLGDSGFIVVREGCTIFRSPVQQHGFNFTYQLESGNGGDLPSSGEVFTIPVASGDVVIAGTDGLFDNLYNNEVTAVVVHAVRAGLEPQVTAQKIAALARQRALDRNRQTPFSTAAQEAGFRYYGGKLDDITVVISYITKVN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1484 442 Gene3D - 341 441 IPR036457 -
Glsi05g1484 442 Gene3D - 204 331 IPR036457 -
Glsi05g1484 442 PANTHER PROTEIN PHOSPHATASE 2C 171 440 IPR039123 -
Glsi05g1484 442 SUPERFAMILY PP2C-like 203 435 IPR036457 -
Glsi05g1484 442 FunFam 5-azacytidine resistance protein azr1 207 332 - -
Glsi05g1484 442 Pfam Stage II sporulation protein E (SpoIIE) 226 436 IPR001932 -
Glsi05g1484 442 SMART PP2C_SIG_2 198 438 IPR001932 -
Glsi05g1484 442 SMART PP2C_4 189 436 IPR001932 -
Glsi05g1484 442 ProSiteProfiles PPM-type phosphatase domain profile. 202 438 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1484 Glsi-ChrGlsi05 63478083 63481093 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1484 05 63478083 63481093 Glsi09g0541 09 3742093 3744798 CCT
Glsi05g1484 05 63478083 63481093 Glsi05g1484 05 63478083 63481093 ECH
Glsi09g0541 09 3742093 3744798 Glsi05g1484 05 63478083 63481093 ECH