Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0533 ATGAGTTCCGTGAATCTTGGAACATGGGCTAGCCCCAGATCAATGTTCCACCCAGCAGCCAGATCCAGATCCCCAACTTTTAACCTCTTCAATGGTCTCAGAAAGGCACCCATTTCCTTCATTGCCCCTAAACCACGAACACTGCCAATATCCTCTTTCCCCTCTCTTTCCGTCTCTGCAGTGCTCACCAAGGAAGGCGCCATCAAAGAGGAAGAGGAAGAGGAAGAAAAACCCACCTTCAATTTCAAGGCTTACATGCTTCAGAAGGCTAATTCAGTCAACCAAGCCTTGGATGCCGCTATTGCTGTCCGGGAACCCGAGAAGATCCATGAGGCCATGCGATACTCACTTCTTGCTGGCGGCAAGCGCGTCCGCCCAATGCTCTGTATCGCCGCGTGCGAGCTTGTTGGCGGGCACGAAGCATTGGCCATGCCATCTGCTTGCGCCGTTGAGATGATTCATACTATGTCACTGATTCACGATGATCTACCCTGTATGGATAACGATGATCTCCGGCGAGGAAAACCAACAAATCACAAGGTTTTCGGCGAGGATGTTGCGGTTTTAGCCGGCGATGCCCTACTGTCTTTTTCATTCGAGCACATAGCTGTTTCGACGGTGGGTGTGTCGCCTGCGAGGATAATTCGCGCAATTAGTGAGCTAGCGAAGTCGATTGGCTCGGAAGGCCTCGTCGCTGGGCAAGTTGTGGATATAGATTCCGAAGGATTGTCTGATGTAGGGTTGGAAAGACTTGAATTCATTCATATTCACAAAACTGCAGCGTTGCTGGAAGCGGCAGTTGTGCTCGGAGCAATCGTTGGAGGTGGGTCAGACGAGGAAGTTGAAAAATTGAGGAAGTTCGCGAGGTACATCGGATTGCTGTTTCAGGTTGTGGATGATATTCTTGATGTTACCAAATCGTCGCAGGAATTGGGGAAGACTGCAGGGAAGGACTTGGTGGCTGATAAAGTTACATATCCGAAACTTTTGGGGATAGAAAAATCGAGGGAGTTTGCTGAGAAATTGAACAAGGATGCCCGACACCAGCTCTCTGGGTTTGATCCGGACAAAGCGGCCCCCTTGATTGCTTTAGCCAATTACATTGCATACAGGCAGAACTAG 1122 0.4982 MSSVNLGTWASPRSMFHPAARSRSPTFNLFNGLRKAPISFIAPKPRTLPISSFPSLSVSAVLTKEGAIKEEEEEEEKPTFNFKAYMLQKANSVNQALDAAIAVREPEKIHEAMRYSLLAGGKRVRPMLCIAACELVGGHEALAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHIAVSTVGVSPARIIRAISELAKSIGSEGLVAGQVVDIDSEGLSDVGLERLEFIHIHKTAALLEAAVVLGAIVGGGSDEEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKDARHQLSGFDPDKAAPLIALANYIAYRQN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0533 373 ProSitePatterns Polyprenyl synthases signature 1. 158 174 IPR033749 -
Glsi09g0533 373 Pfam Polyprenyl synthetase 107 343 IPR000092 GO:0008299
Glsi09g0533 373 SUPERFAMILY Terpenoid synthases 83 355 IPR008949 -
Glsi09g0533 373 CDD Trans_IPPS_HT 105 371 IPR000092 GO:0008299
Glsi09g0533 373 ProSitePatterns Polyprenyl synthases signature 2. 291 303 IPR033749 -
Glsi09g0533 373 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 52 373 - -
Glsi09g0533 373 FunFam Geranylgeranyl diphosphate synthase 79 373 - -
Glsi09g0533 373 SFLD Polyprenyl Transferase Like 84 371 - -
Glsi09g0533 373 SFLD Isoprenoid Synthase Type I 84 371 - -
Glsi09g0533 373 Gene3D Farnesyl Diphosphate Synthase 74 373 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0533 Glsi-ChrGlsi09 3685860 3686981 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1505 05 63662939 63664054 Glsi09g0533 09 3685860 3686981 CCT
Glsi09g0533 09 3685860 3686981 Glsi09g0533 09 3685860 3686981 ECH
Glsi09g0533 09 3685860 3686981 Glsi05g1505 05 63662939 63664054 ECH