Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1505 ATGAGTTCTGTGAATCTTGGTACATGGAGTCGCCCCAGTTCTATGTTCAACCATGCAGGCAGATCCAGATCCCCAACTCTCAACCTCCTCAACGGTCACAGAAAGGTGCCCGTTTCCTTCGTTACCCCCAAAAGACAAAAACTGCCAATAAATTCATTCTCGTTTACTTCCGTTTCTGCAGTGCTCACCAAGGGTGACACTGTCAGAGGTGAAGAGGAAAAGACACCCACCTTCAATTTCAAGGACTACATGCTCCAGAAAGCTAATAAAGTAAACCAAGCCTTGGATGCGGCTATTGCCCTGCGGGAACCCCAGAAGATCTACGAGGCCATGCGGTACTCCCTCCTTGCTGGGGGCAAGCGCGTACGCCCAATTCTCTGTATCGCCGCGTGTGAGCTTGTTGGCGGCCGGGAAGACATGGCCATGCCAGCTGCTTGCGCCATCGAGATGATTCATACCATGTCACTGATTCACGATGATCTACCCTGTATGGACAACGATGATCTCCGGCGAGGTAAACCCACGAATCACAAGGTTTTCGGCGAGGATGTTGCAGTTCTAGCCGGCGATGCTCTGCTGGCTTTTTCATTCGAGCACATAGCTGTTTCCACAGTGGGTGTACCATCTACGAGGATAATCCGCGCAATTGCTGAGTTAGCCAAGTCGATTGGCTGCGAAGGCGTCGTTGCTGGGCAAGTTGTGGATATAAATTCTGAAGGATTATCTGATGTGGGGTTGGATATTCTCGAATTTATTCATGTTCACAAAACCGCAGCTTTGCTGGAGGGGGCTGTTGTCCTCGGAGCTATAGTTGGAGGTGGGTCAGACCAGGAAGTTGAAAAATTAAGGAAGTTCGCGAGGTATATCGGATTGCTGTTTCAGGTTGTCGATGATATTCTCGACGTTACCAAATCATCTCAGGAATTGGGGAAGACAGCGGGGAAAGACTTGGTGGCTGATAAAGTTACATATCCGAAACTAATAGGGATCGAAAAATCGAGGGAGTTTGCTCAGAAACTGAACAAGGATGCCCAAGATCAGCTCTCTGGGTTTGATCCAGAAAAAGCGGCTCCCTTGATTGCTTTGGCTAATTACATTGCTTACAGGCAAAACTAG 1116 0.4884 MSSVNLGTWSRPSSMFNHAGRSRSPTLNLLNGHRKVPVSFVTPKRQKLPINSFSFTSVSAVLTKGDTVRGEEEKTPTFNFKDYMLQKANKVNQALDAAIALREPQKIYEAMRYSLLAGGKRVRPILCIAACELVGGREDMAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFEHIAVSTVGVPSTRIIRAIAELAKSIGCEGVVAGQVVDINSEGLSDVGLDILEFIHVHKTAALLEGAVVLGAIVGGGSDQEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLIGIEKSREFAQKLNKDAQDQLSGFDPEKAAPLIALANYIAYRQN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1505 371 ProSitePatterns Polyprenyl synthases signature 2. 289 301 IPR033749 -
Glsi05g1505 371 Gene3D Farnesyl Diphosphate Synthase 77 371 IPR008949 -
Glsi05g1505 371 SFLD Isoprenoid Synthase Type I 82 369 - -
Glsi05g1505 371 SUPERFAMILY Terpenoid synthases 80 353 IPR008949 -
Glsi05g1505 371 CDD Trans_IPPS_HT 103 369 IPR000092 GO:0008299
Glsi05g1505 371 ProSitePatterns Polyprenyl synthases signature 1. 156 172 IPR033749 -
Glsi05g1505 371 SFLD Polyprenyl Transferase Like 82 369 - -
Glsi05g1505 371 Pfam Polyprenyl synthetase 105 341 IPR000092 GO:0008299
Glsi05g1505 371 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 39 371 - -
Glsi05g1505 371 FunFam Geranylgeranyl diphosphate synthase 77 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1505 Glsi-ChrGlsi05 63662939 63664054 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1505 05 63662939 63664054 Glsi09g0533 09 3685860 3686981 CCT
Glsi05g1505 05 63662939 63664054 Glsi05g1505 05 63662939 63664054 ECH
Glsi09g0533 09 3685860 3686981 Glsi05g1505 05 63662939 63664054 ECH