Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0428 ATGGACGCAGGAGCAGCCGGCGCCGGCGTTGCTGCCGACGATATCTCTCCGACAGCCGCCATATCGCGATGGAAATTCGCCGTGGCCCGGCAGTATCAGTATCTCCTCGACAAAACGACACCGCACATCCTCCAACGTTGGATCGCCTGCTCAGTCGTTGCCTTCATCTATATCGTCCGCGTCTACTTCGTCCAGGGGTTCTACATCGTCTCATATGGTCTAGGCATTTACATCCTCAACCTTCTCATCGGATTTCTCTCCCCTCAGGTGGACCCCGAGATCCAGGAACTCTCTGATGGTCCCGCCCTGCCCACCAGGGGGTCCGATGAATTCCGTCCTTTTGTTCGCCGGTTGCCGGAGTTCAAGTTCTGGTACTCAATCACAAAGGCATTTTGCATTGCGTTTGTGATGACTTTCTTTAGTGCATTTGATGTACCAGTGTTTTGGCCAATACTCCTTTTCTACTGGGTAGTCCTATTCTCGCTTACTATGAGGAGACAGATATCTCACATGATCAAATACAAATATGTGCCATTCACATTTGGTAAACAGCGCTATGATGGAAAGCGAGCACCAGGAGAGAGCACGAGCCTTCTGAGGGACTGA 606 0.5149 MDAGAAGAGVAADDISPTAAISRWKFAVARQYQYLLDKTTPHILQRWIACSVVAFIYIVRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELSDGPALPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYKYVPFTFGKQRYDGKRAPGESTSLLRD 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0428 201 Pfam Rer1 family 26 186 IPR004932 GO:0016020
Glsi09g0428 201 PANTHER PROTEIN RER1 13 190 IPR004932 GO:0016020
Glsi09g0428 201 PIRSF AtER_Rer1p 10 197 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0428 Glsi-ChrGlsi09 2937313 2938769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0428 1 194 Miscellaneous Gene Families AT4G39220 67.010 5.01e-94 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1637 05 64622063 64623981 Glsi09g0428 09 2937313 2938769 CCT
Glsi09g0428 09 2937313 2938769 Glsi09g0428 09 2937313 2938769 ECH