Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1637 ATGGACGCGGGAGCAGCCGGCGCCGGCGTCTCCGCCGACGATCTCTCTTCAACAGCCCCTATATACCGATGGAAATTCGCCATGTCTCAGCAGTATCAGCACCTCCTCGACAAAACGACACCGCACGTCCTCCACCGTTGGATCGCCTGTTTAGTTGTTGTCTTCATCTACATCGTTCGCGTCTACTTCATCGAAGGCTTCTACATCGTCTCGTATGGTCTAGGCATTTACATCCTCAACCTTCTCATCGGATTTCTCTCCCCTCAGGTGGACCCCCAGATCCAAGAACTCTCTGATGGTCCCACCCTCCCCACGAGGGGTTCCGATGAGTTTCGTCCTTTTGTTCGCCGGCTGCCGGAGTTCAAATTCTGGTACTCAATCACAAAGGCATTTTGCATTGCGTTTGTGATGACTTTCTTTAGTGCGTTTGACGTACCAGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCTCGCTTACCATGAGGAGACAGATATCTCACATGATCAAATACAAATATGTGCCTTTCACATTTGGGAAACAGCGCTATGGAAAGAGAGAAGCAGCTGAAAGCACAAGCCTTCTCGAGCAATATGAGGATGTGGTGGCTGAAGAATGTTGCCTTGAGGACTAG 642 0.5031 MDAGAAGAGVSADDLSSTAPIYRWKFAMSQQYQHLLDKTTPHVLHRWIACLVVVFIYIVRVYFIEGFYIVSYGLGIYILNLLIGFLSPQVDPQIQELSDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYKYVPFTFGKQRYGKREAAESTSLLEQYEDVVAEECCLED 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1637 213 PANTHER PROTEIN RER1 11 192 IPR004932 GO:0016020
Glsi05g1637 213 Pfam Rer1 family 25 187 IPR004932 GO:0016020
Glsi05g1637 213 PIRSF AtER_Rer1p 9 197 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1637 Glsi-ChrGlsi05 64622063 64623981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1637 11 196 Miscellaneous Gene Families AT4G39220 68.280 1.07e-95 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1637 05 64622063 64623981 Glsi09g0428 09 2937313 2938769 CCT
Glsi05g1637 05 64622063 64623981 Glsi05g1637 05 64622063 64623981 ECH