Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0272 ATGCAGGCGCTTATCCACGTCTATCGGTCTACGGTGGTGCAAGTGTTTGAGTTGGAGATGGCAGACTTACCAGGTTATCTTCGTTCCTGCTGTGACACAGGGAAACTTGCCTTATTGTCACTTTTGGTATCTGGTGGGATCGTCTTGCAAATTTTGGCATGTGCATTGTATAATAATTGGTGGCCGATGTTAAGTGCATTAATGTATGTTCTTCTTCCCATGCCTTTGCTGTTCTTCACGGGGTCTGATGGTTATTCTTTATTTTCTGAATCTGATAGCAGTTGGGTGAATGCAACCAAGTTCTTGACTGGAGCCTCAGCTATTGGAAGCATCGCCATACCAACAATATTAAAGCATGCTGGGGTTATTGGATGGGGAGCATTCGCAATGGATGTCTCTTCCTTCTTTGTGTTTGTATTAGCCATAATGTGTTACATAAAGATGAATGACGACGATGATTACACGATGCTTTGA 474 0.4304 MQALIHVYRSTVVQVFELEMADLPGYLRSCCDTGKLALLSLLVSGGIVLQILACALYNNWWPMLSALMYVLLPMPLLFFTGSDGYSLFSESDSSWVNATKFLTGASAIGSIAIPTILKHAGVIGWGAFAMDVSSFFVFVLAIMCYIKMNDDDDYTML 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0272 157 Pfam Vacuolar protein sorting 55 37 152 IPR007262 -
Glsi09g0272 157 PANTHER LEPTIN RECEPTOR-RELATED 35 153 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0272 Glsi-ChrGlsi09 1944177 1946323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0272 20 153 EF-hand Containing Proteins AT1G32410 72.388 5.43e-70 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1799 05 65672186 65673756 Glsi09g0272 09 1944177 1946323 CCT