Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1799 ATGTCAGACTTACCAGGATATGTGAATTCCTGCTTCGACACAGGGAAACTTGCCTTTTTGGCACTTATGGTCTCTGGAGGGATCGTCTTGCAAATTTTGGCATGTGCCTTATATAATAATTGGTGGCCAATGCTAACTGTGATAATGGTTGTGCTTCTTTCAATGCCTTTGCTGTTCTTTGCGGGATCAGATCATTCTTCTATGTTTTCTGAATCTGATAATAGCTGGGTGAATGCAACCAAGTTCTTGACTGGAGCCTCAGCTGTTGGAAGCATTGCCATTCCAATTATATTAAAGCATGCTGGTATTATTTGTTGGGGTGCACTTGCACTGGAACTCTCTTCCCTCCTTGTGTTTGTATTAGCCATCATGTGTTACATATGGATTAGTGCGCAAGATGATTACAGTATGCTTTAA 417 0.4125 MSDLPGYVNSCFDTGKLAFLALMVSGGIVLQILACALYNNWWPMLTVIMVVLLSMPLLFFAGSDHSSMFSESDNSWVNATKFLTGASAVGSIAIPIILKHAGIICWGALALELSSLLVFVLAIMCYIWISAQDDYSML 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1799 138 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
Glsi05g1799 138 PANTHER LEPTIN RECEPTOR-RELATED 16 135 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1799 Glsi-ChrGlsi05 65672186 65673756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1799 1 135 EF-hand Containing Proteins AT1G32410 72.059 2.19e-67 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1799 05 65672186 65673756 Glsi09g0272 09 1944177 1946323 CCT