Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1659 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTACAAGCTGATGGAAAGTCCATCAGGTATGTGTCATCTGAATTGGCTACAGATGTTGTCATAAATGTTGGTGAAGTGAAGTTTTACCTTCACAAGTTCCCTATACTTTCCAAGAGCAATCGATTGCAAAAGCTGGTATCACAGGCTAATGAAGAGGATTCCGATGAAGTTTACTTGGCTGATTTTCCTGGAGGGCCCAAGGCGTTTGAAATATGTGCAAAGTTCTGCTACGGAATGAATGTTACTCTTAACGCTTACAATGTTGTGGCTGCTCGTTGTGCAGCTGAGTATCTTGAGATGACTGAGGATATTGATAGGGGAAACTTAATTTTTAAAATTGAGGTGTTTCTTAACTCCGGTATCTTTCGCAGCTGGAAGGATTCCATTATTGTTTTACAAACTGCTAAAGCACTTCTGCCGTGGTCTGAAGATCTGAATATAATTGGAAGATGCATAGATTCCATAGCTTCTAAGACTTCCGTTGACCCAGAAAACATCACATGGTCCTACACACATAACAGGAAATTAACCGAGACCGATAAGATTACTGAGGACAAGATGACATTTCAAGAAAAAATTGGGTCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAACTGGACATTGATCTTTACAGACGAGTAATGATTGCTGTGAAAGCAAAGGGAAGAATGGATGGTATTGTGATTGGAGAGGCACTAAAAATCTATGCAGTCAGGTGGTTGCCTGATTCTATTGATGCATTGGTTTCTGATGCTCATGCGTGGAGGAACAAATGTCTGGTAGAAACCATTGTCTGTTTATTGCCATCTGACTATGGTGTGGGCTGTTCATGTAGTTTCTTGCTGAAGCTATTAAAAGTGGCCATATTAGTTGGAGCAGATGAGTCATCAAAAGAACTACTGATGAAGAGCATCTGCCTAAAATTGCATGAAGCTTCTGTCAAAGATTTATTGATCCCTGCAAGGTCTCCTCAGATTACCAAATATGATGTTCAGTTGGTACAATGTCTTTTGAATCAATACATGAATGAGAAGGGCGGCTGTGATGTCGAAGTTGCAGAGAAGAAAGATAAAGGAAATGACAAATCTATTTTAGGTTATAGGTCCTTGGTGAATATGGGCAAGTTGTTGGATGGTTATCTTGCAGAAATTGCACTTGATCCGAATCTCAGCCTCGCTAGTTTTGTTGACTTGTCACAATCAGTTCCAGGATCTGCTAGGCCAAATCATGATGGTCTTTACAGAGCTATTGACATCTACTTGAAGGAACACCCAGATTTGACAAAAGCTGAAAGGAAGAAGATATGTGGAGTTATGGATGTGAAGAAGTTGACAGTGGATGCATCTATGCATGCTGCACAGAATGAGCGTCTTCCGCTTCGGGTTGTAGTGCAGGTTCTCTTTTTTGAGCAGGTCAGAGCTTCCGCCAACGTTCAAGCTCTAGGTAATAATAATCCTTCACACTCAATGAGGAGTGCAGATGAAGAATGTGAGAAAGCAGCCGGAGAGAACTGCCAATCCCTCAGGAACCAGATGAATCATTTGAAGATCAAAGATGAAGAGTTCCGGAAGAATGGGAAACTGGGTAAGAAGAATAGCAAAAACAGCAGAAGTGGCATGCAATTGCTGCCTTCACGTTCAAGGAGAATATTTGATAAGCTATGGATGGTGGGTAAAGGACAAGGAGAGAACAGGAGTTCCGAGACTTCAGGGAGTTCTAATAGCCCAACTTCTATAGTCCCAGGAGACACCAAGTCATCCGGCTCTTCCTCAAGACATAGGAGACATTCCATCTCTTAG 1842 0.4169 MKFMKLGSKPDALQADGKSIRYVSSELATDVVINVGEVKFYLHKFPILSKSNRLQKLVSQANEEDSDEVYLADFPGGPKAFEICAKFCYGMNVTLNAYNVVAARCAAEYLEMTEDIDRGNLIFKIEVFLNSGIFRSWKDSIIVLQTAKALLPWSEDLNIIGRCIDSIASKTSVDPENITWSYTHNRKLTETDKITEDKMTFQEKIGSVPKDWWVEDICELDIDLYRRVMIAVKAKGRMDGIVIGEALKIYAVRWLPDSIDALVSDAHAWRNKCLVETIVCLLPSDYGVGCSCSFLLKLLKVAILVGADESSKELLMKSICLKLHEASVKDLLIPARSPQITKYDVQLVQCLLNQYMNEKGGCDVEVAEKKDKGNDKSILGYRSLVNMGKLLDGYLAEIALDPNLSLASFVDLSQSVPGSARPNHDGLYRAIDIYLKEHPDLTKAERKKICGVMDVKKLTVDASMHAAQNERLPLRVVVQVLFFEQVRASANVQALGNNNPSHSMRSADEECEKAAGENCQSLRNQMNHLKIKDEEFRKNGKLGKKNSKNSRSGMQLLPSRSRRIFDKLWMVGKGQGENRSSETSGSSNSPTSIVPGDTKSSGSSSRHRRHSIS 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1659 613 MobiDBLite consensus disorder prediction 538 558 - -
Glsi08g1659 613 CDD BTB_POZ_NPY3-like 21 124 - -
Glsi08g1659 613 PANTHER OS12G0117600 PROTEIN 24 565 IPR043454 -
Glsi08g1659 613 Coils Coil 519 539 - -
Glsi08g1659 613 Pfam NPH3 family 211 463 IPR027356 -
Glsi08g1659 613 Gene3D Potassium Channel Kv1.1; Chain A 8 118 IPR011333 -
Glsi08g1659 613 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Glsi08g1659 613 MobiDBLite consensus disorder prediction 576 601 - -
Glsi08g1659 613 ProSiteProfiles NPH3 domain profile. 211 487 IPR027356 -
Glsi08g1659 613 Pfam BTB/POZ domain 25 115 IPR000210 GO:0005515
Glsi08g1659 613 MobiDBLite consensus disorder prediction 571 613 - -
Glsi08g1659 613 SUPERFAMILY POZ domain 22 115 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1659 Glsi-ChrGlsi08 11835242 11838643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1659 22 504 EF-hand Containing Proteins AT3G44820 33.268 5.33e-91 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0630 10 3958250 3962547 Glsi08g1659 08 11835242 11838643 CCT