Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0257 ATGCGGAACTCCCTTCAGAATAATGTACTTGGCTTTTTAATTCCTAAAAGAAGTATAAGAACACAGACCAAATTAAGCAGTTCAAGAATAAGAGGGGAAGACACCGATCGTACAGTTGAAGAAAAGCCATTTCCGATAGCTTTTCTGGTAAAAGAAGAGAACTTCTTCGATACTTCGCCATTTTTGTCTCTCAACTCAAAATACAAAGGATTTGAGAGGACGACATGGACAGCGGTGGCACACATAGTGACTGGGGTAATAGGGTCTGGAGTGCTGTCTCTGGCATGGAGTATGGCACAGCTTGGGTGGGTTGCTGGGCCATTGGCCATGGTATTCTTTGCTTGCGTCACTCTCTTGTCTGCTTTCCTTCTCTGCAACACCTATCGTTCTCCAGATCCAGAATATGGCCCTCACAGGCATCCCTCCTATGTTGATGCTGTTCATTTGCATTTAGGAAAAAATAATGGACTGCTCTGTAGCTTTTTTGTGCATATAAGCTTGTATGGGTTCACAGTTGCCTACGTCATTACATCAACTATCAGCCTAAGAGCAATCCAAAAATCTAATGGTTACCAAAACCAAGGGCATGAAGCAGCATGTGGATTTGATGACGTATATTTTATGCTGTTTTTCGGGGCTATCCAAATTGTTTTGTCACAGATACCCAACTTCCATAACATAGAATGGCTGTCAGTTCTTGCTGCAATTACATCTTTTGCTTATTCTTTCATAGGAATGGGGCTTGCTATGGCACGAGTTGTAGAAAATGGAACTGTGAAGGGTGGCATTGAAGGAATCAGTACCTCTAGTGCAACTGAAAAAGTGTGGCTGATTGCTCAAGCGCTTGGGGACATAGCATTTTCCTATCCATTCTCTGTAATTCTTATAGAAATACAGGACACTTTGAAGTCTCCTCCGCCAGAAACTCAAACCATGAAGAAGGCCTCAACAATATCGGTCATCATCACAACATTTTTCTACCTTTGTTGTGGATGTTCTGGATATGCAGCCTTTGGTGATAAAACACCAGGAAACCTTTTAACAGGGTTTGGACCCTATAAGCCTCATTGGCTTGTAGACTTTGCCAATGCTTGTATAGTGCTTCATCTAGTTGGCGCATATCAGGTGTACAGCCAGCCTCTTTTTGCTAATGTTGAAAATTGGTTCCGTTCCAAGTTCCCAGACAGTGAATTTGTGAATCACACACACACCCTGAAACTCTCATTGCTGCCAGCTTTTGGACTAAATTTTCTCAGGCTGACTTTCCGAACTGTTTATGTTGCATCAACAGTTGTTATTGCAGTGATCTTTCCCTATTTCAATCAGATTTTGGGAGTTCTGGGTGGCATAAACTTTTGGCCACTGACCATATATTTTCCAGTGGAAATGTACCTGAGCCTCTGCAATATTGAAGCATGGACGGCTAAGTGGGTCATGCTTAGGACATTTAGCCTTGTTTGCTTTATGGTGGGATCATTTGCTCTCATTGGATCCATTGAAGGGATAGTAACTGCAAAATTAAGCTGA 1527 0.4224 MRNSLQNNVLGFLIPKRSIRTQTKLSSSRIRGEDTDRTVEEKPFPIAFLVKEENFFDTSPFLSLNSKYKGFERTTWTAVAHIVTGVIGSGVLSLAWSMAQLGWVAGPLAMVFFACVTLLSAFLLCNTYRSPDPEYGPHRHPSYVDAVHLHLGKNNGLLCSFFVHISLYGFTVAYVITSTISLRAIQKSNGYQNQGHEAACGFDDVYFMLFFGAIQIVLSQIPNFHNIEWLSVLAAITSFAYSFIGMGLAMARVVENGTVKGGIEGISTSSATEKVWLIAQALGDIAFSYPFSVILIEIQDTLKSPPPETQTMKKASTISVIITTFFYLCCGCSGYAAFGDKTPGNLLTGFGPYKPHWLVDFANACIVLHLVGAYQVYSQPLFANVENWFRSKFPDSEFVNHTHTLKLSLLPAFGLNFLRLTFRTVYVASTVVIAVIFPYFNQILGVLGGINFWPLTIYFPVEMYLSLCNIEAWTAKWVMLRTFSLVCFMVGSFALIGSIEGIVTAKLS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0257 508 PANTHER OS05G0424000 PROTEIN-RELATED 74 498 - -
Glsi08g0257 508 Pfam Transmembrane amino acid transporter protein 74 503 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0257 Glsi-ChrGlsi08 2427273 2434578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0257 59 490 Organic Solute Cotransporters AT1G77380 51.152 1.49e-155 450
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0257 08 2427273 2434578 Glsi10g1865 10 12989671 13002394 CCT
Glsi08g0257 08 2427273 2434578 Glsi08g0257 08 2427273 2434578 ECH