Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2201 ATGGGGAATTGCTTAACTAAGAGTCCAACTAAGGATAATGATTCTGATCATAATGTGGAGTTTGCTGCTGGGAATGTGCATCTTATTACCACTAAAGAATCTTGGGACCAGAAGTTGGAAGAAGCAAGGAAGGATGGCAAAATTGTGATTGCCAATTTCAGTGCAACGTGGTGCGGTCCTTGTAAGATGATTGCACCATTTTATTGCGAGCTATCTGAGAAATACCCATCTATGATGTTCTTGGTTGTTGATGTGGATGAATTAACCGACTTCAGCACTTCCTGGGATATCAAAGCCACTCCAACTTTTTTCTTTCTCAGAGATGGACAACAGGTTGACAAACTGGTAGGAGCCAACAAGCCAGAGCTGCAGAAGAAAATTGTTGCCATTACTGATTCAATTGTTCAGTGTCAATAG 417 0.4125 MGNCLTKSPTKDNDSDHNVEFAAGNVHLITTKESWDQKLEEARKDGKIVIANFSATWCGPCKMIAPFYCELSEKYPSMMFLVVDVDELTDFSTSWDIKATPTFFFLRDGQQVDKLVGANKPELQKKIVAITDSIVQCQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2201 138 PRINTS Thioredoxin family signature 57 66 - -
Glsi07g2201 138 PRINTS Thioredoxin family signature 96 107 - -
Glsi07g2201 138 PRINTS Thioredoxin family signature 49 57 - -
Glsi07g2201 138 CDD TRX_family 33 127 - -
Glsi07g2201 138 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Glsi07g2201 138 FunFam Thioredoxin H9 1 138 - -
Glsi07g2201 138 Pfam Thioredoxin 29 127 IPR013766 -
Glsi07g2201 138 SUPERFAMILY Thioredoxin-like 22 129 IPR036249 -
Glsi07g2201 138 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Glsi07g2201 138 Gene3D Glutaredoxin 1 138 - -
Glsi07g2201 138 PANTHER THIOREDOXIN 26 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2201 Glsi-ChrGlsi07 67206429 67209399 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g2063 06 67841985 67848213 Glsi07g2201 07 67206429 67209399 CCT