Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2063 ATGCTTTCGTTGTCACTCTCTTTGAAGCTATGTAGAAATAGTTATATGCTGCAAACCTTCCCCATGGGATCTATAATTATGGTAGAAACATCTTCTCAAGGGAGGGCACTTTGGTCATTTCGTTATCAACTGTCGGTCTCGTTCAATTCAAAGATGGAGGGCTTTCATACTAACCGTATCTATACCAAATTATTATTTTTTTCATTTCCTTTCTCGCAAGAGCAGCTAATAAAGGAATGTTGCTGCTCTTCTCCTAGCTACTATAGTTTCAGATTTCGGAGATTGCAGGCATCCTTACATCTGCTCTTGCGCATCAAATCTTCAAAATTAGTGTTGGTGTACTTTGCAGGCTGTTTGCACAATCAAGTATTGCATAGATTTATCAATAAGCTTCAGTTATTAAATCAGTACTACGTGAAGGATTACAAGTTTGTTGCTTTGAGACAAGAATATGGGGACTTGCATGTTTTTGGGATATTCCAATTACTTACTCAAAATGGTCTGAATATACTTAGTTGTGGTTACTGCCGGTGGCCTATGTCTCGAAAAAGGGATAAGGATAATGATTCTGATCATCATGTTGATTATGCTGCTGGGAAAGTGCAACTTATTACCACCAAAGAATCCTGGGAACAAAAGTTGGCAGAAGCAACAAGGGATGGCAGGATTGTGGTTGCAAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGACGATTGCGCCATATTACTGCGAGTTATCTGAGAAATACCCATCTTTGATGTTCTTAGCAGTTGATGTTGATGAACTTGCTGACTTGAGCACTTCCTGGGACATAAAAGCCACTCCAACTTTCTTTTTTCTAAAAAATGGACAACAGCTTGACAAACTTGTAGGAGCCAACAAAACTGAGCTGCAGAAGAAGATTGATGGCATTAATGAATCAAATGGCAAGCCCTAG 939 0.393 MLSLSLSLKLCRNSYMLQTFPMGSIIMVETSSQGRALWSFRYQLSVSFNSKMEGFHTNRIYTKLLFFSFPFSQEQLIKECCCSSPSYYSFRFRRLQASLHLLLRIKSSKLVLVYFAGCLHNQVLHRFINKLQLLNQYYVKDYKFVALRQEYGDLHVFGIFQLLTQNGLNILSCGYCRWPMSRKRDKDNDSDHHVDYAAGKVQLITTKESWEQKLAEATRDGRIVVANFSATWCGPCKTIAPYYCELSEKYPSLMFLAVDVDELADLSTSWDIKATPTFFFLKNGQQLDKLVGANKTELQKKIDGINESNGKP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2063 312 FunFam Thioredoxin 198 307 - -
Glsi06g2063 312 CDD TRX_family 208 303 - -
Glsi06g2063 312 ProSiteProfiles Thioredoxin domain profile. 181 307 IPR013766 -
Glsi06g2063 312 Coils Coil 200 220 - -
Glsi06g2063 312 ProSitePatterns Thioredoxin family active site. 225 243 IPR017937 -
Glsi06g2063 312 SUPERFAMILY Thioredoxin-like 196 305 IPR036249 -
Glsi06g2063 312 PANTHER THIOREDOXIN 201 303 - -
Glsi06g2063 312 Gene3D Glutaredoxin 174 309 - -
Glsi06g2063 312 Pfam Thioredoxin 204 303 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2063 Glsi-ChrGlsi06 67841985 67848213 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g2063 06 67841985 67848213 Glsi07g2201 07 67206429 67209399 CCT
Glsi06g2063 06 67841985 67848213 Glsi06g2063 06 67841985 67848213 ECH